RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GLIPR1L1Q6UWM5 242 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF439Q8NDP4 499 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 APH1BQ8WW43 257 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 SMIM19Q96E16 107 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 UBE2E2Q96LR5 201 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF251Q9BRH9 671 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 KLK15Q9H2R5 256 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 FGF20Q9NP95 211 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-202ENST00000562722 ISYNA1Q9NPH2 558 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 OR2S2Q9NQN1 319 aa10.12□□□□□ -0.79
SF3B3-202ENST00000562722 MRPS18AQ9NVS2 196 aaKnown RBP10.12□□□□□ -0.79
SF3B3-202ENST00000562722 TRAV41A0A0B4J266 112 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 UBE2QL1A1L167 161 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 MAGEA13PA6NCF6 341 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 ATP6V0E1O15342 81 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 LANCL1O43813 399 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 SAP30O75446 220 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 CRTAPO75718 401 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-202ENST00000562722 RCC1P18754 421 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-202ENST00000562722 DCKP27707 260 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 ACTBP60709 375 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 GABPB1Q06547 395 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF555Q8NEP9 628 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 GHSRQ92847 366 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 SLC29A1Q99808 456 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 CHCHD6Q9BRQ6 235 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 ABHD14AQ9BUJ0 271 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 SELENOIQ9C0D9 397 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 OR51J1Q9H342 316 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 BANF2Q9H503 90 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 TAF9BQ9HBM6 251 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 CHCHD3Q9NX63 227 aaKnown RBP10.11□□□□□ -0.79
SF3B3-202ENST00000562722 BABAM2Q9NXR7 383 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 RCC2Q9P258 522 aaKnown RBP10.11□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF580Q9UK33 172 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 RYR2Q92736 4967 aa10.11□□□□□ -0.79
SF3B3-202ENST00000562722 TRAV8-7A0A075B6U6 113 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 A0A1W2PPK0 400 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 IRGMA1A4Y4 181 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 NBR2O15453 112 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 IGFBP3P17936 291 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-202ENST00000562722 PPP1CCP36873 323 aaKnown RBP10.1□□□□□ -0.79
SF3B3-202ENST00000562722 VHLP40337 213 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 GNB1P62873 340 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 ADARB1P78563 741 aaKnown RBP10.1□□□□□ -0.79
SF3B3-202ENST00000562722 MED21Q13503 144 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 GNMTQ14749 295 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 Q499Y3 187 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 STEAP3Q658P3 488 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 ZNF429Q86V71 674 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 C10orf67Q8IYJ2 551 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 ZFP41Q8N8Y5 198 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 OR52L2PQ8NGH6 319 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 MRPS24Q96EL2 167 aaKnown RBP10.1□□□□□ -0.79
SF3B3-202ENST00000562722 RCHY1Q96PM5 261 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 MRPL20Q9BYC9 149 aaKnown RBP10.1□□□□□ -0.79
SF3B3-202ENST00000562722 KIAA1456Q9P272 454 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 ERGIC3Q9Y282 383 aa10.1□□□□□ -0.79
SF3B3-202ENST00000562722 EXOSC1Q9Y3B2 195 aaKnown RBP10.1□□□□□ -0.79
SF3B3-202ENST00000562722 TRBV5-5A0A0J9YX44 114 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 PNMA8CA0A1B0GUJ8 204 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 I3L521 148 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 OVOL1O14753 267 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 OGG1O15527 345 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 CA11O75493 328 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 WBP4O75554 376 aaKnown RBP10.09□□□□□ -0.79
SF3B3-202ENST00000562722 HLA-DRB1P01911 266 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 MAS1P04201 325 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 MGMTP16455 207 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 CNTFRP26992 372 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 BLVRBP30043 206 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-202ENST00000562722 PPIFP30405 207 aaKnown RBP10.09□□□□□ -0.79
SF3B3-202ENST00000562722 RAB9AP51151 201 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 MORN2Q502X0 79 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 YIF1BQ5BJH7 314 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 ASPHD1Q5U4P2 390 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 LIN54Q6MZP7 749 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 OVCH2Q7RTZ1 564 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 MUC7Q8TAX7 377 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 MYOZ3Q8TDC0 251 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 DCUN1D4Q92564 292 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 OR14A2Q96R54 314 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 ANKRD60Q9BZ19 345 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 ALX4Q9H161 411 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-202ENST00000562722 PALMDQ9NP74 551 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 JPT1Q9UK76 154 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 A3GALT2U3KPV4 340 aa10.09□□□□□ -0.79
SF3B3-202ENST00000562722 IGHV7-81A0A0B4J1V7 117 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 RGS11O94810 467 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 LALBAP00709 142 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 FSTP19883 344 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 FUT3P21217 361 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 OR3A3P47888 321 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 RUNX1Q01196 453 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 PLGLAQ15195 96 aa10.08□□□□□ -0.8
SF3B3-202ENST00000562722 C5orf64Q2M2E5 130 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms