RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 C13orf42A0A1B0GVH6 325 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 MARCH11A6NNE9 402 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 SH2D1BO14796 132 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 ANGPT2O15123 496 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 HLA-DRB1P01911 266 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 TRGV3P03979 118 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 S100A6P06703 90 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 H1F0P07305 194 aaKnown RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 OCM2P0CE71 109 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 OCMP0CE72 109 aaPredicted RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 SMIM18P0DKX4 95 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 EGR2P11161 476 aaPredicted RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 PRKACAP17612 351 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 KDELR2P33947 212 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 KIR2DS2P43631 304 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 MRPL19P49406 292 aaKnown RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 EIF2B2P49770 351 aaKnown RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 SELENOWP63302 87 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 SCN1BQ07699 218 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 LRRC36Q1X8D7 754 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 MRGPRG-AS1Q2M3A8 158 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 RPEL1Q2QD12 228 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 ZNF829Q3KNS6 432 aaPredicted RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 ACTBL2Q562R1 376 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 FAHD1Q6P587 224 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 SLC25A26Q70HW3 274 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 SHFQ7M4L6 423 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 TCTEX1D1Q8N7M0 179 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 ZNF565Q8N9K5 539 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 TMEM104Q8NE00 496 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 DNAAF1Q8NEP3 725 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 RFESDQ8TAC1 157 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 OR51E1Q8TCB6 317 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 THEM6Q8WUY1 208 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 RTN4IP1Q8WWV3 396 aaPredicted RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 BORCS5Q969J3 196 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 INTS14Q96SY0 518 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 CIB1Q99828 191 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 CADM1Q9BY67 442 aaKnown RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 ANKRD60Q9BZ19 345 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 CST11Q9H112 138 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 ANKRD19PQ9H560 264 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 SEBOXQ9HB31 216 aaPredicted RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 GPR84Q9NQS5 396 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 RBFOX1Q9NWB1 397 aaKnown RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 CALYQ9NYX4 217 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 CNOT2Q9NZN8 540 aaKnown RBP3.92□□□□□ -1.78
HERC1-213ENST00000561359 PEMTQ9UBM1 199 aa3.92□□□□□ -1.78
HERC1-213ENST00000561359 A0A0B4J203 849 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 TRBV4-1A0A0J9YWV2 114 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 A0A1W2PRQ8 180 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 TMEM120BA0PK00 339 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 A6NIN4 97 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 ZNF701M0R085 212 aaPredicted RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 UBE2CO00762 179 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 SNNO75324 88 aaPredicted RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 ENTPD6O75354 484 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 DHRS3O75911 302 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 OR2A4O95047 310 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 ZNF682O95780 498 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 OR2H2O95918 312 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 IL1AP01583 271 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 CSTBP04080 98 aaKnown RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 P0DMU3 169 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 FAM231AP0DMU4 169 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 FAM231CP0DMU5 169 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 CLUP10909 449 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 ZNF44P15621 663 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 SPI1P17947 270 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 GCSHP23434 173 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 IL3RAP26951 378 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 C21orf33P30042 268 aaPredicted RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 HTR1FP30939 366 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 BLVRAP53004 296 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 LINC00205P59089 165 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 NDPQ00604 133 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 TMEM267Q0VDI3 215 aaPredicted RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 FOXI1Q12951 378 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 MED21Q13503 144 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 DGCR6Q14129 220 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 ATXN7L3Q14CW9 347 aaPredicted RBP3.91□□□□□ -1.78
HERC1-213ENST00000561359 ZNF146Q15072 292 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 RGS21Q2M5E4 152 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 DEFB114Q30KQ6 69 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 MOGAT2Q3SYC2 334 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 IFI44LQ53G44 452 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 SPIN3Q5JUX0 258 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 C1orf134Q5TEV5 83 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 LIN54Q6MZP7 749 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 FAM122CQ6P4D5 195 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 ERICH5Q6P6B1 374 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 UNQ5815/PRO19632Q6UWF5 114 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 IDO2Q6ZQW0 420 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 Q8IYB0 196 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 FAM58AQ8N1B3 248 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 SLC37A3Q8NCC5 494 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 OR52B4Q8NGK2 314 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 UBALD1Q8TB05 177 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 COQ2Q96H96 371 aa3.91□□□□□ -1.78
HERC1-213ENST00000561359 TEAD3Q99594 435 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms