RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	RCC2	Q9P258	522 aa	Known RBP	10.82	□□□□□ -0.68
IDH3A-222	ENST00000561279	VSIG4	Q9Y279	399 aa		10.82	□□□□□ -0.68
IDH3A-222	ENST00000561279	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.82	□□□□□ -0.68
IDH3A-222	ENST00000561279	PEX16	Q9Y5Y5	336 aa		10.82	□□□□□ -0.68
IDH3A-222	ENST00000561279	SMAD5-AS1	Q9Y6J3	95 aa		10.82	□□□□□ -0.68
IDH3A-222	ENST00000561279		A0A1W2PP11	408 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	FAM90A10P	A6NDY2	464 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	FAM90A7P	A6NKC0	464 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	FAM90A23P	A8MXZ1	464 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	SLC2A2	P11168	524 aa	Predicted RBP	10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	IGFBP3	P17936	291 aa	Predicted RBP	10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	VHL	P40337	213 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	RUNX1	Q01196	453 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	LSAMP	Q13449	338 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279		Q499Y3	187 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	MORN2	Q502X0	79 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	YIF1B	Q5BJH7	314 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	NKAPL	Q5M9Q1	402 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	OR2G6	Q5TZ20	316 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	GLIPR1L1	Q6UWM5	242 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	ZNF554	Q86TJ5	538 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	JAGN1	Q8N5M9	183 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	ZNF491	Q8N8L2	437 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	SLC29A1	Q99808	456 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	ZNF251	Q9BRH9	671 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	OR51J1	Q9H342	316 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	LRRC42	Q9Y546	428 aa		10.81	□□□□□ -0.68
IDH3A-222	ENST00000561279	TRBV5-5	A0A0J9YX44	114 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	RGS11	O94810	467 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	RCC1	P18754	421 aa	Predicted RBP	10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	FUT3	P21217	361 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	MYF6	P23409	242 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	PPIF	P30405	207 aa	Known RBP	10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	AWAT2	Q6E213	333 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	LIN54	Q6MZP7	749 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	GAPT	Q8N292	157 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	OR1L1	Q8NH94	360 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	MYOZ3	Q8TDC0	251 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	APH1B	Q8WW43	257 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	MUL1	Q969V5	352 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	ORAI1	Q96D31	301 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	SELENOI	Q9C0D9	397 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	TAF9B	Q9HBM6	251 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	WSB1	Q9Y6I7	421 aa		10.8	□□□□□ -0.68
IDH3A-222	ENST00000561279	SORL1	Q92673	2214 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	TRAV41	A0A0B4J266	112 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279		I3L521	148 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	HLA-DRB1	P01911	266 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	FST	P19883	344 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	RAB9A	P51151	201 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	ACTB	P60709	375 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	SMN1	Q16637	294 aa	Known RBP	10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	GALM	Q96C23	342 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	RDH12	Q96NR8	316 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	ABHD14A	Q9BUJ0	271 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	CST11	Q9H112	138 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	KLK15	Q9H2R5	256 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	GHITM	Q9H3K2	345 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	PARP11	Q9NR21	331 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	KIAA1456	Q9P272	454 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	JPT1	Q9UK76	154 aa		10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	DIMT1	Q9UNQ2	313 aa	Known RBP	10.79	□□□□□ -0.68
IDH3A-222	ENST00000561279	TRAV8-7	A0A075B6U6	113 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	UBE2QL1	A1L167	161 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279		G3V318	75 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	OVOL1	O14753	267 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	ATP6V0E1	O15342	81 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	NBR2	O15453	112 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	YPEL1	O60688	119 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	WBP4	O75554	376 aa	Known RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	CRTAP	O75718	401 aa	Predicted RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	SC5D	O75845	299 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	IGLV1-40	P01703	118 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	MGMT	P16455	207 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	CAPG	P40121	348 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	TAS2R43	P59537	309 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	HTD2	P86397	168 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	KIAA0141	Q14154	515 aa	Predicted RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	DMKN	Q6E0U4	476 aa	Predicted RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	OR13C5	Q8NGS8	318 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	TMEM80	Q96HE8	168 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	YPEL2	Q96QA6	119 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	OR5B12	Q96R08	314 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	ANKRD60	Q9BZ19	345 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	BANF2	Q9H503	90 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	GNB4	Q9HAV0	340 aa		10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	MBNL3	Q9NUK0	354 aa	Known RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	SMPD3	Q9NY59	655 aa	Predicted RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.78	□□□□□ -0.68
IDH3A-222	ENST00000561279	MAS1	P04201	325 aa		10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	ADARB1	P78563	741 aa	Known RBP	10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	C5orf64	Q2M2E5	130 aa		10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	LY6G6F	Q5SQ64	297 aa		10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	PQLC1	Q8N2U9	271 aa		10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	NPB	Q8NG41	125 aa		10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	OR52L2P	Q8NGH6	319 aa		10.77	□□□□□ -0.69
IDH3A-222	ENST00000561279	MUC7	Q8TAX7	377 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms