RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CTF1Q16619 201 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 SRSF7Q16629 238 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPM1-229ENST00000561242 HLA-DRB5Q30154 266 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 TGIF2LXQ8IUE1 241 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 SNX29P2Q8IUI4 249 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 OR8H3Q8N146 312 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 OR52L2PQ8NGH6 319 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 OR5H6Q8NGV6 325 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 FCAMRQ8WWV6 532 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 ABHD14AQ9BUJ0 271 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 MBNL3Q9NUK0 354 aaKnown RBP8.73□□□□□ -1.01
TPM1-229ENST00000561242 NECAP2Q9NVZ3 263 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 EXTL2Q9UBQ6 330 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 MYO9AB2RTY4 2548 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 A0A0A6YYD4 124 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 H3BUX3 64 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 ZNF701M0R085 212 aaPredicted RBP8.72□□□□□ -1.01
TPM1-229ENST00000561242 MFNGO00587 321 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 RBBP9O75884 186 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 FCGR3AP08637 254 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 CD34P28906 385 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 DLX1P56177 255 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 DLX6P56179 175 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 TAS2R46P59540 309 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 TAS2R20P59543 309 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 HERV-K104P61576 105 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 LY6EQ16553 131 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 MOGAT2Q3SYC2 334 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 MORN2Q502X0 79 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 PLAC9Q5JTB6 97 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 TPTE2P1Q5T6R2 138 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 CNIH2Q6PI25 160 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 C12orf54Q6X4T0 127 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 NR2C2APQ86WQ0 139 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 BEST4Q8NFU0 473 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 OR5H2Q8NGV7 314 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 LEAP2Q969E1 77 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 DUX5Q96PT3 197 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 DCUN1D5Q9BTE7 237 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 NPFFR1Q9GZQ6 430 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 MEGF9Q9H1U4 602 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 AUNIPQ9H7T9 357 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 SCPEP1Q9HB40 452 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 PDZD2O15018 2839 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 ITPR2Q14571 2701 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 TANC2Q9HCD6 1990 aa8.72□□□□□ -1.01
TPM1-229ENST00000561242 A0A087X0M5 115 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 A0A1B0GX30 115 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 A0A1W2PPE3 182 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 FABP12A6NFH5 140 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 DNAJC9-AS1A6NH13 148 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 H3BMQ9 156 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 C15orf65H3BRN8 121 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 M0QZK8 103 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 SULT1C2O00338 296 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 HSD17B6O14756 317 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 FCN3O75636 299 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 MMP23AO75900 390 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 TPPPO94811 219 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 NAPSAO96009 420 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 FSHBP01225 129 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 APOA2P02652 100 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 MELTFP08582 738 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 SCTP09683 121 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 PPP1CCP36873 323 aaKnown RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 LUMP51884 338 aaPredicted RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 ACTBP60709 375 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 RPL15P61313 204 aaKnown RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 UBA52P62987 128 aaKnown RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 MRPS10P82664 201 aaKnown RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 FOXL1Q12952 345 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 SPCS2Q15005 226 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 HMGN3Q15651 99 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 ZNF260Q3ZCT1 412 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 SPANXN2Q5MJ10 180 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 LDLRAD3Q86YD5 345 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 GAPTQ8N292 157 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 C8orf31Q8N9H6 132 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 OR4C13Q8NGP0 309 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 OR4F5Q8NH21 305 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 FAM216AQ8WUB2 273 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 NUDCD2Q8WVJ2 157 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 HDHD3Q9BSH5 251 aaPredicted RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 MMP27Q9H306 513 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 LINC00574Q9H8X3 128 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 BEX1Q9HBH7 125 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.71□□□□□ -1.02
TPM1-229ENST00000561242 BATF3Q9NR55 127 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 KIAA1456Q9P272 454 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.02
TPM1-229ENST00000561242 VPREB3Q9UKI3 123 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 DCHS2Q6V1P9 2916 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 NBPF19A0A087WUL8 3843 aa8.71□□□□□ -1.02
TPM1-229ENST00000561242 A0A1B0GUS0 222 aa8.7□□□□□ -1.02
TPM1-229ENST00000561242 MDFIC2A0A1B0GVS7 189 aa8.7□□□□□ -1.02
TPM1-229ENST00000561242 NCBP2LA6PVI3 153 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms