RNA–Protein interactions for RNA: ENST00000561169.5

KNSTRN-213, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-213ENST00000561169 GNG12Q9UBI6 72 aa13.72□□□□□ -0.21
KNSTRN-213ENST00000561169 ELF5Q9UKW6 265 aaPredicted RBP13.72□□□□□ -0.21
KNSTRN-213ENST00000561169 GNB3P16520 340 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 CT45A1Q5HYN5 189 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 ZNF554Q86TJ5 538 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 LINC00311Q8N616 119 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 OR4F5Q8NH21 305 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 CT45A3Q8NHU0 189 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 LINC01006Q8NI28 216 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 TOMM40LQ969M1 308 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 PTX4Q96A99 478 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 SLC25A38Q96DW6 304 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 RAB3CQ96E17 227 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 PARP12Q9H0J9 701 aaKnown RBP13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 C12orf4Q9NQ89 552 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 ABCB10Q9NRK6 738 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 KCNIP1Q9NZI2 227 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 SIGLEC9Q9Y336 463 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 MMP24Q9Y5R2 645 aa13.71□□□□□ -0.21
KNSTRN-213ENST00000561169 A0A075B6Q4 140 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 HIST1H1DP16402 221 aaKnown RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 RPS19P39019 145 aaKnown RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 NCS1P62166 190 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 SRSF4Q08170 494 aaKnown RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 MADCAM1Q13477 382 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 SLC25A48Q6ZT89 311 aaKnown RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 MOB1BQ7L9L4 216 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 C3orf56Q8N813 242 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 C8orf31Q8N9H6 132 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 OR10X1Q8NGY0 326 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 SETD6Q8TBK2 473 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 CFHR4Q92496 578 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 ST6GALNAC6Q969X2 333 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 RPEQ96AT9 228 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 RBMXL1Q96E39 390 aaKnown RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 CMSS1Q9BQ75 279 aaKnown RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 Q9N2K0 584 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 OR2S2Q9NQN1 319 aa13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 AMMECR1Q9Y4X0 333 aaPredicted RBP13.71□□□□□ -0.22
KNSTRN-213ENST00000561169 TIMM23O14925 209 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 TSPAN9O75954 239 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 CEACAM3P40198 252 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 RANBP1P43487 201 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 REG1BP48304 166 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 KRTAP10-3P60369 221 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 TMEM30BQ3MIR4 351 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 MORN2Q502X0 79 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 IDNKQ5T6J7 187 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 OR56B4Q8NH76 319 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 CREB3L1Q96BA8 519 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 OCSTAMPQ9BR26 566 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 ATG5Q9H1Y0 275 aa13.7□□□□□ -0.22
KNSTRN-213ENST00000561169 FBN3Q75N90 2809 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 IGKV1-6A0A0C4DH72 117 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 CLPSL1A2RUU4 121 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 OOSP1A8MZH6 123 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 HSD17B6O14756 317 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 ALDH3B2P48448 385 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 HLA-DRB3P79483 266 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 HTD2P86397 168 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 Q3ZCU0 254 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 Q6ZS46 218 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 DRAM1Q8N682 238 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 IL1F10Q8WWZ1 152 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 MAFIPQ8WZ33 124 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 ZNF747Q9BV97 191 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 MRPS26Q9BYN8 205 aaKnown RBP13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 RIMS4Q9H426 269 aaPredicted RBP13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 C16orf95Q9H693 158 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 RHBDL2Q9NX52 303 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 OR1A1Q9P1Q5 309 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 JPT1Q9UK76 154 aa13.69□□□□□ -0.22
KNSTRN-213ENST00000561169 FAM90A9PA6NNJ1 464 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 TFAP2AP05549 437 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 FCGR3AP08637 254 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 SCTP09683 121 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 PROK1P58294 105 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 VBP1P61758 197 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 HABP2Q14520 560 aaPredicted RBP13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 HERPUD1Q15011 391 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 LIAT1Q6ZQX7 453 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 ZNF702PQ9H963 129 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 BEX1Q9HBH7 125 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 RAB9BQ9NP90 201 aa13.68□□□□□ -0.22
KNSTRN-213ENST00000561169 IGHV3-72A0A0B4J1Y9 119 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 METTL21EPA6NDL7 271 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 CD3GP09693 182 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 ZNF137PP52743 207 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 ZNF816Q0VGE8 651 aaPredicted RBP13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 CCDC144NLQ6NUI1 221 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 ODF3L1Q8IXM7 274 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 GALMQ96C23 342 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 ABHD14AQ9BUJ0 271 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 RAB18Q9NP72 206 aa13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 ZNF230Q9UIE0 474 aaPredicted RBP13.67□□□□□ -0.22
KNSTRN-213ENST00000561169 RNF114Q9Y508 228 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms