RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SDCBPO00560 298 aaPredicted RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 TOR1AO14656 332 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 ITGB1BP1O14713 200 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 TPPPO94811 219 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 FCGR3AP08637 254 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 SOX6P35712 828 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 CEACAM3P40198 252 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 ZNF137PP52743 207 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 RPL15P61313 204 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 HLA-DRB3P79483 266 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 ARFRP1Q13795 201 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 MZT2AQ6P582 158 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 SLC25A48Q6ZT89 311 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 LHFPL4Q7Z7J7 247 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 SAMD12Q8N8I0 201 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 C17orf50Q8WW18 174 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 ZDHHC16Q969W1 377 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 MMP28Q9H239 520 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 DPAGT1Q9H3H5 408 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 CHMP1AQ9HD42 196 aaPredicted RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 OR2S2Q9NQN1 319 aa7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 CCDC59Q9P031 241 aaKnown RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 ELF5Q9UKW6 265 aaPredicted RBP7.79□□□□□ -1.16
RABGGTA-221ENST00000561055 A0A075B6Q4 140 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 TRAV18A0A075B6X5 111 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 TRIM77I1YAP6 450 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 HOXA3O43365 443 aaPredicted RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 SSX5O60225 188 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 NOL3O60936 208 aaKnown RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 RGS11O94810 467 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 EIF4EP06730 217 aaKnown RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 SCTP09683 121 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 MNDAP41218 407 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 KIR2DS4P43632 304 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 ZNF134P52741 427 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 UBA52P62987 128 aaKnown RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 MRPS15P82914 257 aaKnown RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 BAMBIQ13145 260 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 KIR2DS1Q14954 304 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 SLC9A3R2Q15599 337 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 CT45A1Q5HYN5 189 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 DYNAPQ8N1N2 210 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 OR4A4PQ8NGN8 299 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 OR5R1Q8NH85 324 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 CT45A3Q8NHU0 189 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 PIFOQ8TCI5 191 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 FAM216AQ8WUB2 273 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 ST6GALNAC6Q969X2 333 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 SSX3Q99909 188 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 NXF2Q9GZY0 626 aaKnown RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 GHITMQ9H3K2 345 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 AUNIPQ9H7T9 357 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 NDUFA13Q9P0J0 144 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 COMMD3Q9UBI1 195 aa7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 AMMECR1Q9Y4X0 333 aaPredicted RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 FBN1P35555 2871 aaKnown RBP7.78□□□□□ -1.16
RABGGTA-221ENST00000561055 TRBV6-7A0A0A0MS04 114 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 IGHV3-43A0A0B4J1X8 118 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 IGKV1-6A0A0C4DH72 117 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 SMIM31A0A1B0GVY4 71 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 FAM172BPA6NC97 362 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 TMEM235A6NFC5 223 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 FABP7O15540 132 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 HLA-DQB1P01920 261 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 IGHV3-43DP0DP04 118 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 ELK1P19419 428 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 TALDO1P37837 337 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 ZNF816Q0VGE8 651 aaPredicted RBP7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 MADCAM1Q13477 382 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 HABP2Q14520 560 aaPredicted RBP7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 HERPUD1Q15011 391 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 SSX2Q16385 188 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 LTC4SQ16873 150 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 LRRC75BQ2VPJ9 315 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 TPTE2P1Q5T6R2 138 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 FAM53AQ6NSI3 398 aaPredicted RBP7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 C16orf87Q6PH81 154 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 C5orf24Q7Z6I8 188 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 OR8H3Q8N146 312 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 PRR18Q8N4B5 295 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 OR52L2PQ8NGH6 319 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 UBALD1Q8TB05 177 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 SETD6Q8TBK2 473 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 LEAP2Q969E1 77 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 CABLES2Q9BTV7 478 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 SLIRPQ9GZT3 109 aaKnown RBP7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 GNG12Q9UBI6 72 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 RSL24D1Q9UHA3 163 aaKnown RBP7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 A3GALT2U3KPV4 340 aa7.77□□□□□ -1.17
RABGGTA-221ENST00000561055 IGKV1D-8A0A087WSZ0 117 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 FAM90A9PA6NNJ1 464 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 HPGDSO60760 199 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 IGHV4-59P01825 116 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 GSTT2P0CG29 244 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 GSTT2BP0CG30 244 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 NAT1P18440 290 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 ZBTB25P24278 435 aa7.76□□□□□ -1.17
RABGGTA-221ENST00000561055 CBX5P45973 191 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms