RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CIB1Q99828 191 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 GABARAPL3Q9BY60 117 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 PAK1IP1Q9NWT1 392 aaPredicted RBP14.23□□□□□ -0.13
TPM1-226ENST00000560959 POMPQ9Y244 141 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 FOXA2Q9Y261 457 aaPredicted RBP14.23□□□□□ -0.13
TPM1-226ENST00000560959 GMPPBQ9Y5P6 360 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 C12orf77C9JDV5 145 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 AIPO00170 330 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 GEMIN2O14893 280 aaKnown RBP14.22□□□□□ -0.13
TPM1-226ENST00000560959 SOX15O60248 233 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 NDUFA3O95167 84 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 GYS2P54840 703 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 GNGT1P63211 74 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 TMEM267Q0VDI3 215 aaPredicted RBP14.22□□□□□ -0.13
TPM1-226ENST00000560959 MRPL28Q13084 256 aaKnown RBP14.22□□□□□ -0.13
TPM1-226ENST00000560959 CD200R1LQ6Q8B3 271 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 ANKRD13BQ86YJ7 626 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 RBMXL1Q96E39 390 aaKnown RBP14.22□□□□□ -0.13
TPM1-226ENST00000560959 RITA1Q96K30 269 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 FAM192AQ9GZU8 254 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 NUBP2Q9Y5Y2 271 aa14.22□□□□□ -0.13
TPM1-226ENST00000560959 A0A1W2PN81 502 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 ATP8B1O43520 1251 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 ZNF780AO75290 641 aaPredicted RBP14.21□□□□□ -0.13
TPM1-226ENST00000560959 ARSBP15848 533 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 CHRNA7P36544 502 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 C6orf183Q5T699 404 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 LPCAT4Q643R3 524 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 TRAT1Q6PIZ9 186 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 GAPTQ8N292 157 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 SYS1Q8N2H4 156 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 OR5AK2Q8NH90 309 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 RHOVQ96L33 236 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 SPACA1Q9HBV2 294 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 KIAA1456Q9P272 454 aa14.21□□□□□ -0.13
TPM1-226ENST00000560959 EXOGQ9Y2C4 368 aaKnown RBP14.21□□□□□ -0.13
TPM1-226ENST00000560959 ALMS1Q8TCU4 4167 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 H0Y980 276 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 CDRT1O95170 752 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 CNTFRP26992 372 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 MORN2Q502X0 79 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 ATAD3CQ5T2N8 411 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 SYT6Q5T7P8 510 aaPredicted RBP14.2□□□□□ -0.14
TPM1-226ENST00000560959 MEDAGQ5VYS4 303 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 OR51A2Q8NGJ7 313 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 NEK7Q8TDX7 302 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 TRAPPC2LQ9UL33 140 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 RNF150Q9ULK6 438 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 ING4Q9UNL4 249 aa14.2□□□□□ -0.14
TPM1-226ENST00000560959 HBZP02008 142 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 ECSCRQ19T08 205 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 DNAL1Q4LDG9 190 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 AKIRIN2Q53H80 203 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 OR10V1Q8NGI7 309 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 TSEN15Q8WW01 171 aaKnown RBP14.19□□□□□ -0.14
TPM1-226ENST00000560959 S100A13Q99584 98 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 NABP2Q9BQ15 211 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 PDCD1LG2Q9BQ51 273 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 SLA2Q9H6Q3 261 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 FBXO7Q9Y3I1 522 aa14.19□□□□□ -0.14
TPM1-226ENST00000560959 MCRIP1C9JLW8 97 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 CA11O75493 328 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 EGR2P11161 476 aaPredicted RBP14.18□□□□□ -0.14
TPM1-226ENST00000560959 GTF2F2P13984 249 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 ZP3P21754 424 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 FASP25445 335 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 CD40LGP29965 261 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 CX3CL1P78423 397 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 NDPQ00604 133 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 LY6G6FQ5SQ64 297 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 ZNF554Q86TJ5 538 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 ODF3L1Q8IXM7 274 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 TUBA4BQ9H853 241 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 TMEM138Q9NPI0 162 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 OR2S2Q9NQN1 319 aa14.18□□□□□ -0.14
TPM1-226ENST00000560959 RCC2Q9P258 522 aaKnown RBP14.18□□□□□ -0.14
TPM1-226ENST00000560959 SNTNA6NMZ2 147 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 GYG2O15488 501 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 ZNF93P35789 620 aaPredicted RBP14.17□□□□□ -0.14
TPM1-226ENST00000560959 SNRPGP62308 76 aaKnown RBP14.17□□□□□ -0.14
TPM1-226ENST00000560959 GPR176Q14439 515 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 ZNF833PQ6ZTB9 187 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 HAPLN4Q86UW8 402 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 OR1L1Q8NH94 360 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 THAP7Q9BT49 309 aaPredicted RBP14.17□□□□□ -0.14
TPM1-226ENST00000560959 ABHD14AQ9BUJ0 271 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 RSRP1Q9BUV0 290 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 ALG8Q9BVK2 526 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 MRPL20Q9BYC9 149 aaKnown RBP14.17□□□□□ -0.14
TPM1-226ENST00000560959 ISG20L2Q9H9L3 353 aaKnown RBP14.17□□□□□ -0.14
TPM1-226ENST00000560959 RANGRFQ9HD47 186 aaPredicted RBP14.17□□□□□ -0.14
TPM1-226ENST00000560959 IMPAD1Q9NX62 359 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 TAS2R4Q9NYW5 299 aa14.17□□□□□ -0.14
TPM1-226ENST00000560959 RGS11O94810 467 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 IGHV3-11P01762 117 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 CD2P06729 351 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 SERPINA2P20848 420 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 ACTBL2Q562R1 376 aa14.16□□□□□ -0.14
TPM1-226ENST00000560959 LINC00322Q6ZN03 302 aaPredicted RBP14.16□□□□□ -0.14
TPM1-226ENST00000560959 LHFPL3Q86UP9 236 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms