RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 COMMD4Q9H0A8 199 aa7.76□□□□□ -1.17
TPM1-225ENST00000560679 C11orf54Q9H0W9 315 aaPredicted RBP7.76□□□□□ -1.17
TPM1-225ENST00000560679 ZNF286AQ9HBT8 521 aa7.76□□□□□ -1.17
TPM1-225ENST00000560679 GPR173Q9NS66 373 aa7.76□□□□□ -1.17
TPM1-225ENST00000560679 SORL1Q92673 2214 aa7.76□□□□□ -1.17
TPM1-225ENST00000560679 LINC00854A0A1B0GVQ3 168 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 LEUTXA8MZ59 168 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 BUB1B-PAK6H3BSN5 160 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 PLA2G10O15496 165 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 PSPNO60542 156 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 DHRS3O75911 302 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 LY86O95711 162 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 IGHG2P01859 326 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
TPM1-225ENST00000560679 CD34P28906 385 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 RIDAP52758 137 aaKnown RBP7.75□□□□□ -1.17
TPM1-225ENST00000560679 MFGE8Q08431 387 aaPredicted RBP7.75□□□□□ -1.17
TPM1-225ENST00000560679 IL24Q13007 206 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 MADCAM1Q13477 382 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 KIR2DS1Q14954 304 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 P2RY14Q15391 338 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 HACD4Q5VWC8 232 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 PYHIN1Q6K0P9 492 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 MZT2BQ6NZ67 158 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 COMMD2Q86X83 199 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 ANGPTL5Q86XS5 388 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 COMMD1Q8N668 190 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 OR5H6Q8NGV6 325 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 ZNF596Q8TC21 504 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 GPR148Q8TDV2 347 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 SNX22Q96L94 193 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 CMTM3Q96MX0 182 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 GFI1Q99684 422 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 PKIBQ9C010 78 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 PBOV1Q9GZY1 135 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 MTCH1Q9NZJ7 389 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 RABL2AQ9UBK7 228 aaPredicted RBP7.75□□□□□ -1.17
TPM1-225ENST00000560679 RABL2BQ9UNT1 228 aa7.75□□□□□ -1.17
TPM1-225ENST00000560679 AK6Q9Y3D8 172 aaKnown RBP7.75□□□□□ -1.17
TPM1-225ENST00000560679 RYR1P21817 5038 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 IGKV1-27A0A075B6S5 117 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 AIPO00170 330 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 SRMP19623 302 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 CDK2P24941 298 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 OR3A1P47881 315 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 INPP1P49441 399 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 ARHGDIBP52566 201 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 P2RX3P56373 397 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 SLC35B1P78383 322 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 GRK1Q15835 563 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 UBE2NLQ5JXB2 153 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 CLVS2Q5SYC1 327 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 HEPN1Q6WQI6 88 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 SLC35E3Q7Z769 313 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 LRRTM1Q86UE6 522 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 RTN4RL2Q86UN3 420 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 AKAP14Q86UN6 197 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 CATSPERDQ86XM0 798 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 RDH10Q8IZV5 341 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 PRSS35Q8N3Z0 413 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 RNF152Q8N8N0 203 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 OR56B4Q8NH76 319 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 ENKURQ8TC29 256 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 LGALS14Q8TCE9 139 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 SLAMF9Q96A28 289 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 NEDD4LQ96PU5 975 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 ZMAT4Q9H898 229 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 NUFIP1Q9UHK0 495 aaKnown RBP7.74□□□□□ -1.17
TPM1-225ENST00000560679 SPATA2Q9UM82 520 aa7.74□□□□□ -1.17
TPM1-225ENST00000560679 UBE2J1Q9Y385 318 aaPredicted RBP7.74□□□□□ -1.17
TPM1-225ENST00000560679 A0A0B4J203 849 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 TMEM269A0A1B0GVZ9 245 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 A0A1W2PPI3 338 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 A6NIN4 97 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 IFITM5A6NNB3 132 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 FGF16O43320 207 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 LYRM1O43325 122 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 HAND1O96004 215 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 TTRP02766 147 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 FAM106CPP0CH98 169 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 CALCBP10092 127 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 GABRR1P24046 479 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 CDX1P47902 265 aaPredicted RBP7.73□□□□□ -1.17
TPM1-225ENST00000560679 SOX2P48431 317 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 VEGFCP49767 419 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 PITPNAQ00169 270 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 HES5Q5TA89 166 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 ASPHD1Q5U4P2 390 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 CCDC144NLQ6NUI1 221 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 TEX38Q6PEX7 206 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 DEGS2Q6QHC5 323 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 TRAPPC6BQ86SZ2 158 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 OR14K1Q8NGZ2 314 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 OR10AC1Q8NH08 325 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 C4orf3Q8WVX3 66 aa7.73□□□□□ -1.17
TPM1-225ENST00000560679 TSEN15Q8WW01 171 aaKnown RBP7.73□□□□□ -1.17
TPM1-225ENST00000560679 TRIM63Q969Q1 353 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms