RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ZNF184Q99676 751 aaPredicted RBP7.14□□□□□ -1.27
HDDC3-204ENST00000559834 C9orf16Q9BUW7 83 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 KLK15Q9H2R5 256 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 OR51J1Q9H342 316 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 ZMAT4Q9H898 229 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 OR2S2Q9NQN1 319 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 BABAM2Q9NXR7 383 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 LRRC42Q9Y546 428 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 PEX16Q9Y5Y5 336 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 WSB1Q9Y6I7 421 aa7.14□□□□□ -1.27
HDDC3-204ENST00000559834 TRAV41A0A0B4J266 112 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 LOC100130705A0A1B0GUX0 176 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 IRGMA1A4Y4 181 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 FAM90A10PA6NDY2 464 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 FAM90A7PA6NKC0 464 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 FAM90A23PA8MXZ1 464 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 G3V318 75 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 OVOL1O14753 267 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 OGG1O15527 345 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 SAP30O75446 220 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 GPX5O75715 221 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 RGS11O94810 467 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 HLA-DRB1P01911 266 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 LIMS3P0CW19 117 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 LIMS4P0CW20 117 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 LYL1P12980 280 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 FUT3P21217 361 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 MYF6P23409 242 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 ACTBP60709 375 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 MED21Q13503 144 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 KIAA0141Q14154 515 aaPredicted RBP7.13□□□□□ -1.27
HDDC3-204ENST00000559834 MORN2Q502X0 79 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 RAB12Q6IQ22 244 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 FAM53AQ6NSI3 398 aaPredicted RBP7.13□□□□□ -1.27
HDDC3-204ENST00000559834 ZNF554Q86TJ5 538 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 SBSPONQ8IVN8 264 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 CDH26Q8IXH8 852 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 OR1L1Q8NH94 360 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 DCUN1D4Q92564 292 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 OR5B12Q96R08 314 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 PALMDQ9NP74 551 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 FGF20Q9NP95 211 aaPredicted RBP7.13□□□□□ -1.27
HDDC3-204ENST00000559834 RCC2Q9P258 522 aaKnown RBP7.13□□□□□ -1.27
HDDC3-204ENST00000559834 KIAA1456Q9P272 454 aa7.13□□□□□ -1.27
HDDC3-204ENST00000559834 A0A1W2PP11 408 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 ATP6V0E1O15342 81 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 NBR2O15453 112 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 YPEL1O60688 119 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 IGFBP3P17936 291 aaPredicted RBP7.12□□□□□ -1.27
HDDC3-204ENST00000559834 RCC1P18754 421 aaPredicted RBP7.12□□□□□ -1.27
HDDC3-204ENST00000559834 MYL12AP19105 171 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 TMEM267Q0VDI3 215 aaPredicted RBP7.12□□□□□ -1.27
HDDC3-204ENST00000559834 DOC2BQ14184 412 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 C5orf64Q2M2E5 130 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 Q499Y3 187 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 YIF1BQ5BJH7 314 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 OR2G6Q5TZ20 316 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 ZNF660Q6AZW8 331 aaPredicted RBP7.12□□□□□ -1.27
HDDC3-204ENST00000559834 XAF1Q6GPH4 301 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 GLIPR1L1Q6UWM5 242 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 GAPTQ8N292 157 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 JAGN1Q8N5M9 183 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 MINDY2Q8NBR6 621 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 NPBQ8NG41 125 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 OR6Q1Q8NGQ2 317 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 GHSRQ92847 366 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 GALMQ96C23 342 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 YPEL2Q96QA6 119 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 ABHD14AQ9BUJ0 271 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 ANKRD60Q9BZ19 345 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 SELENOIQ9C0D9 397 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 CST11Q9H112 138 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 GNB4Q9HAV0 340 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 TAF9BQ9HBM6 251 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 PARP11Q9NR21 331 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 JPT1Q9UK76 154 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 RNF150Q9ULK6 438 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 MRPS28Q9Y2Q9 187 aaKnown RBP7.12□□□□□ -1.27
HDDC3-204ENST00000559834 COL7A1Q02388 2944 aa7.12□□□□□ -1.27
HDDC3-204ENST00000559834 IGHV7-81A0A0B4J1V7 117 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 TRBV5-5A0A0J9YX44 114 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 UBE2QL1A1L167 161 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 LINC01619G3V211 115 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 H3BNX3 289 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 ARPC1BO15143 372 aaKnown RBP7.11□□□□□ -1.27
HDDC3-204ENST00000559834 SC5DO75845 299 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 GP9P14770 177 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 CD40LGP29965 261 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 ETV1P50549 477 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 GNB1P62873 340 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 ADARB1P78563 741 aaKnown RBP7.11□□□□□ -1.27
HDDC3-204ENST00000559834 HTD2P86397 168 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 LY6G6FQ5SQ64 297 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 ASPHD1Q5U4P2 390 aa7.11□□□□□ -1.27
HDDC3-204ENST00000559834 AWAT2Q6E213 333 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms