RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ATG5Q9H1Y0 275 aa15.03■□□□□ -0
CASC4-209ENST00000559222 GNG12Q9UBI6 72 aa15.03■□□□□ -0
CASC4-209ENST00000559222 A0A1W2PPI3 338 aa15.02■□□□□ -0
CASC4-209ENST00000559222 TFAP2AP05549 437 aa15.02■□□□□ -0
CASC4-209ENST00000559222 HIST1H1DP16402 221 aaKnown RBP15.02■□□□□ -0
CASC4-209ENST00000559222 REG1BP48304 166 aa15.02■□□□□ -0
CASC4-209ENST00000559222 VBP1P61758 197 aa15.02■□□□□ -0
CASC4-209ENST00000559222 CT45A1Q5HYN5 189 aa15.02■□□□□ -0
CASC4-209ENST00000559222 TRAT1Q6PIZ9 186 aa15.02■□□□□ -0
CASC4-209ENST00000559222 CT45A3Q8NHU0 189 aa15.02■□□□□ -0
CASC4-209ENST00000559222 MAFIPQ8WZ33 124 aa15.02■□□□□ -0
CASC4-209ENST00000559222 TOMM40LQ969M1 308 aa15.02■□□□□ -0
CASC4-209ENST00000559222 CMSS1Q9BQ75 279 aaKnown RBP15.02■□□□□ -0
CASC4-209ENST00000559222 Q9N2K0 584 aa15.02■□□□□ -0
CASC4-209ENST00000559222 C12orf4Q9NQ89 552 aa15.02■□□□□ -0
CASC4-209ENST00000559222 ABCB10Q9NRK6 738 aa15.02■□□□□ -0
CASC4-209ENST00000559222 KCNIP1Q9NZI2 227 aa15.02■□□□□ -0
CASC4-209ENST00000559222 SIGLEC9Q9Y336 463 aa15.02■□□□□ -0
CASC4-209ENST00000559222 TRBV6-6A0A0A6YYG2 114 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 NDUFA7O95182 113 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 CRYBA1P05813 215 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 ALDH3B2P48448 385 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 DYNLT3P51808 116 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 HLA-DRB3P79483 266 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 FOXL1Q12952 345 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 OR10X1Q8NGY0 326 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 PTX4Q96A99 478 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 OR2S2Q9NQN1 319 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 OR1A1Q9P1Q5 309 aa15.01□□□□□ -0.01
CASC4-209ENST00000559222 NBEAL1Q6ZS30 2694 aa15□□□□□ -0.01
CASC4-209ENST00000559222 IGKV1-6A0A0C4DH72 117 aa15□□□□□ -0.01
CASC4-209ENST00000559222 TIMM23O14925 209 aa15□□□□□ -0.01
CASC4-209ENST00000559222 SCTP09683 121 aa15□□□□□ -0.01
CASC4-209ENST00000559222 SERPINB10P48595 397 aa15□□□□□ -0.01
CASC4-209ENST00000559222 KRTAP10-3P60369 221 aa15□□□□□ -0.01
CASC4-209ENST00000559222 SRSF4Q08170 494 aaKnown RBP15□□□□□ -0.01
CASC4-209ENST00000559222 MORN2Q502X0 79 aa15□□□□□ -0.01
CASC4-209ENST00000559222 SLC25A48Q6ZT89 311 aaKnown RBP15□□□□□ -0.01
CASC4-209ENST00000559222 IZUMO1Q8IYV9 350 aa15□□□□□ -0.01
CASC4-209ENST00000559222 LINC00311Q8N616 119 aa15□□□□□ -0.01
CASC4-209ENST00000559222 OR56B4Q8NH76 319 aa15□□□□□ -0.01
CASC4-209ENST00000559222 LINC01006Q8NI28 216 aa15□□□□□ -0.01
CASC4-209ENST00000559222 IL1F10Q8WWZ1 152 aa15□□□□□ -0.01
CASC4-209ENST00000559222 CFHR4Q92496 578 aa15□□□□□ -0.01
CASC4-209ENST00000559222 RPEQ96AT9 228 aa15□□□□□ -0.01
CASC4-209ENST00000559222 RHBDL2Q9NX52 303 aa15□□□□□ -0.01
CASC4-209ENST00000559222 ZNF230Q9UIE0 474 aaPredicted RBP15□□□□□ -0.01
CASC4-209ENST00000559222 AMMECR1Q9Y4X0 333 aaPredicted RBP15□□□□□ -0.01
CASC4-209ENST00000559222 HSD17B6O14756 317 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 FCGR3AP08637 254 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 CEACAM3P40198 252 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 RPL15P61313 204 aaKnown RBP14.99□□□□□ -0.01
CASC4-209ENST00000559222 MADCAM1Q13477 382 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 HERPUD1Q15011 391 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 GPR107Q5VW38 600 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 Q6ZS46 218 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 MOB1BQ7L9L4 216 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 ZNF554Q86TJ5 538 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 DRAM1Q8N682 238 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 ST6GALNAC6Q969X2 333 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 OCSTAMPQ9BR26 566 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 JPT1Q9UK76 154 aa14.99□□□□□ -0.01
CASC4-209ENST00000559222 IGKV1D-8A0A087WSZ0 117 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 IGHV3-72A0A0B4J1Y9 119 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 METTL21EPA6NDL7 271 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 GABARAPO95166 117 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 CD3GP09693 182 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 RANBP1P43487 201 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 HTD2P86397 168 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 HABP2Q14520 560 aaPredicted RBP14.98□□□□□ -0.01
CASC4-209ENST00000559222 CTF1Q16619 201 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 ODF3L1Q8IXM7 274 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 C8orf31Q8N9H6 132 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 OR4F5Q8NH21 305 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 GALMQ96C23 342 aa14.98□□□□□ -0.01
CASC4-209ENST00000559222 TMEM235A6NFC5 223 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 SH2D7A6NKC9 451 aaPredicted RBP14.97□□□□□ -0.01
CASC4-209ENST00000559222 TSPAN9O75954 239 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 SNRNP70P08621 437 aaKnown RBP14.97□□□□□ -0.01
CASC4-209ENST00000559222 TMEM30BQ3MIR4 351 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 CDNFQ49AH0 187 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 HIST2H2BDQ6DRA6 164 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 ANKRD13BQ86YJ7 626 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 C3orf56Q8N813 242 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 DTX3Q8N9I9 347 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 NUDCD2Q8WVJ2 157 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 CAPSLQ8WWF8 208 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 CREB3L1Q96BA8 519 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 ABHD14AQ9BUJ0 271 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 RIMS4Q9H426 269 aaPredicted RBP14.97□□□□□ -0.01
CASC4-209ENST00000559222 ZNF702PQ9H963 129 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 ABRACLQ9P1F3 81 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 MMP24Q9Y5R2 645 aa14.97□□□□□ -0.01
CASC4-209ENST00000559222 IGHV1-3A0A0C4DH29 117 aa14.96□□□□□ -0.01
CASC4-209ENST00000559222 CLPSL1A2RUU4 121 aa14.96□□□□□ -0.01
CASC4-209ENST00000559222 OOSP1A8MZH6 123 aa14.96□□□□□ -0.01
CASC4-209ENST00000559222 ZNF736B4DX44 427 aaPredicted RBP14.96□□□□□ -0.01
CASC4-209ENST00000559222 ST8SIA5O15466 376 aa14.96□□□□□ -0.01
CASC4-209ENST00000559222 SSX5O60225 188 aa14.96□□□□□ -0.01
CASC4-209ENST00000559222 YPEL1O60688 119 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms