RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ZNF154Q13106 437 aa13.27□□□□□ -0.28
CDC42BPB-204ENST00000559043 ZNF826PQ6ZT77 177 aa13.27□□□□□ -0.28
CDC42BPB-204ENST00000559043 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.28
CDC42BPB-204ENST00000559043 TMA7Q9Y2S6 64 aaKnown RBP13.27□□□□□ -0.28
CDC42BPB-204ENST00000559043 PDZD2O15018 2839 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 SYNGR1O43759 233 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 PTBP3O95758 552 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 PPYP01298 95 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 CD200P41217 278 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 S100A10P60903 97 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 GNG3P63215 75 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 LIAT1Q6ZQX7 453 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 ZNF573Q86YE8 665 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 MSI2Q96DH6 328 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 C18orf12Q96KH6 178 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 CCL19Q99731 98 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 UFSP2Q9NUQ7 469 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 DCAF16Q9NXF7 216 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 IL19Q9UHD0 177 aa13.27□□□□□ -0.29
CDC42BPB-204ENST00000559043 LYNX1G3V0Z9 82 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 DEDDO75618 318 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 LYNX1P0DP58 116 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 HKR1P10072 659 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 HERV-K104P61576 105 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 IL24Q13007 206 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 SP6Q3SY56 376 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 PHLDA2Q53GA4 152 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 IGSF11Q5DX21 431 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 CCDC71LQ8N9Z2 235 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 RTL8AQ9BWD3 113 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 PKIBQ9C010 78 aa13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 ASH1LQ9NR48 2969 aaKnown RBP13.26□□□□□ -0.29
CDC42BPB-204ENST00000559043 H7C1Q1 480 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 TAAR5O14804 337 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 RHBDL1O75783 438 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 FAM219AQ8IW50 185 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 SPERTQ8NA61 448 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 GLYATL2Q8WU03 294 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 DIRC2Q96SL1 478 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 SPACA1Q9HBV2 294 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 GCM1Q9NP62 436 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 ARID1AO14497 2285 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 DYSFO75923 2080 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 CDIPTO14735 213 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 COL8A2P25067 703 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 KCNJ3P48549 501 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 IL13RA2Q14627 380 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 MOGAT3Q86VF5 341 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 TLNRD1Q9H1K6 362 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 RHOFQ9HBH0 211 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 TAS2R3Q9NYW6 316 aa13.25□□□□□ -0.29
CDC42BPB-204ENST00000559043 FLNBO75369 2602 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 TRBV6-6A0A0A6YYG2 114 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 GLAP06280 429 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 PRKACAP17612 351 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 LDLRAD3Q86YD5 345 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 FAM185AQ8N0U4 392 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 LGI3Q8N145 548 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 STPG2Q8N412 459 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 OR11L1Q8NGX0 322 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 RNF141Q8WVD5 230 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 RIMS4Q9H426 269 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 IFT22Q9H7X7 185 aa13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 MAP1AP78559 2803 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-204ENST00000559043 KIR2DS1A0A191URI9 304 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 FAM157CP0CG43 387 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 RPL12P30050 165 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 GNRHRP30968 328 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 KIR2DS4P43632 304 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 GATA4P43694 442 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 RND3P61587 244 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 KIR2DS1Q14954 304 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 LYZL2Q7Z4W2 148 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 OR5T2Q8NGG2 359 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 ZNF488Q96MN9 340 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 RAB1BQ9H0U4 201 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 SAP30LQ9HAJ7 183 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 PCDHB10Q9UN67 800 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 LRP5LA4QPB2 252 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 TRDCB7Z8K6 153 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 K7EPK0 472 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 MPPED1O15442 326 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 TUSC2O75896 110 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 DIRAS3O95661 229 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 IGHV4-39P01824 125 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 TK1P04183 234 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 SCTP09683 121 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 CTXN2P0C2S0 81 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 TNFSF4P23510 183 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 EIF5AP63241 154 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 HERPUD1Q15011 391 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 UQCC3Q6UW78 93 aa13.23□□□□□ -0.29
CDC42BPB-204ENST00000559043 WDR82Q6UXN9 313 aa13.23□□□□□ -0.29
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