RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 IGHV3-7P01780 117 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 CD3DP04234 171 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 IL7P13232 177 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 CD99P14209 185 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 MMP9P14780 707 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 GATA3P23771 443 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 ZBTB25P24278 435 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 HRH1P35367 487 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 INPP1P49441 399 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 LOXL3P58215 753 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 TAS2R46P59540 309 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 TAS2R19P59542 299 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 HTD2P86397 168 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 PRB3Q04118 309 aaPredicted RBP7.87□□□□□ -1.15
CUX1-216ENST00000558469 HERPUD1Q15011 391 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 CDK10Q15131 360 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 ZNF57Q68EA5 555 aaPredicted RBP7.87□□□□□ -1.15
CUX1-216ENST00000558469 FAM53AQ6NSI3 398 aaPredicted RBP7.87□□□□□ -1.15
CUX1-216ENST00000558469 TOMM5Q8N4H5 51 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 TMEM229BQ8NBD8 167 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 OR10A7Q8NGE5 316 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 OR52L2PQ8NGH6 319 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 OR10V1Q8NGI7 309 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 OR5H2Q8NGV7 314 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 OR10J5Q8NHC4 309 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 LEAP2Q969E1 77 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 TRIM63Q969Q1 353 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 GINS4Q9BRT9 223 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 CCDC32Q9BV29 185 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 SUCNR1Q9BXA5 334 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 SIRT7Q9NRC8 400 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 ABCB10Q9NRK6 738 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 NECAP2Q9NVZ3 263 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 TAS2R8Q9NYW2 309 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 OR1A1Q9P1Q5 309 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 GNG12Q9UBI6 72 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 SLC23A1Q9UHI7 598 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 AUP1Q9Y679 476 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 SESN1Q9Y6P5 492 aa7.87□□□□□ -1.15
CUX1-216ENST00000558469 TRBV6-7A0A0A0MS04 114 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 LINC00854A0A1B0GVQ3 168 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 CD5LO43866 347 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 CTXN2P0C2S0 81 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 AKAIN1P0CW23 69 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 PRTN3P24158 256 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 PPP1CCP36873 323 aaKnown RBP7.86□□□□□ -1.15
CUX1-216ENST00000558469 CEACAM6P40199 344 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 AP3S2P59780 193 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 KRTAP1-1Q07627 177 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 GNMTQ14749 295 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 MORN2Q502X0 79 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 UTF1Q5T230 341 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 STEAP3Q658P3 488 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 STEAP1BQ6NZ63 245 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 PDZD9Q8IXQ8 264 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 OR4D10Q8NGI6 311 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 OR52M1Q8NGK5 317 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 TBX15Q96SF7 602 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 CABLES2Q9BTV7 478 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 TINAGL1Q9GZM7 467 aaPredicted RBP7.86□□□□□ -1.15
CUX1-216ENST00000558469 TMEM133Q9H2Q1 129 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 GFOD1Q9NXC2 390 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 EHFQ9NZC4 300 aa7.86□□□□□ -1.15
CUX1-216ENST00000558469 ZNF107Q9UII5 783 aaPredicted RBP7.86□□□□□ -1.15
CUX1-216ENST00000558469 A0A1W2PPE3 182 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 J3QLI3 93 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 RGS11O94810 467 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 DIRAS3O95661 229 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 RAB3DO95716 219 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 CD74P04233 296 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 IFNA6P05013 189 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 OR5H8P0DN80 308 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 HOXB4P17483 251 aaPredicted RBP7.85□□□□□ -1.15
CUX1-216ENST00000558469 TBPP20226 339 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 NFYAP23511 347 aaPredicted RBP7.85□□□□□ -1.15
CUX1-216ENST00000558469 COX7A1P24310 79 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 FCGR2CP31995 323 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 GNG10P50151 68 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 TSPAN5P62079 268 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 KLRD1Q13241 179 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 DYRK1AQ13627 763 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 KLF9Q13886 244 aaPredicted RBP7.85□□□□□ -1.15
CUX1-216ENST00000558469 TMEM30BQ3MIR4 351 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 ACTBL2Q562R1 376 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 RNASE10Q5GAN6 216 aaKnown RBP7.85□□□□□ -1.15
CUX1-216ENST00000558469 FAAP20Q6NZ36 180 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 TREML4Q6UXN2 200 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 OVCH2Q7RTZ1 564 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 ABHD12Q8N2K0 398 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 PNKDQ8N490 385 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 OR13D1Q8NGV5 346 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 LHX4Q969G2 390 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 SMR3AQ99954 134 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 CLEC7AQ9BXN2 247 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 HEXA-AS1Q9H8Q6 139 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 UNKLQ9H9P5 680 aaKnown RBP7.85□□□□□ -1.15
CUX1-216ENST00000558469 YAE1D1Q9NRH1 226 aa7.85□□□□□ -1.15
CUX1-216ENST00000558469 RDH8Q9NYR8 311 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms