RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 M0R1B8 84 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 FCGR3BO75015 233 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 IGKV1-13P0DP09 117 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 CRYGSP22914 178 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 TMEM105Q8N8V8 129 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 RAB39BQ96DA2 213 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 GPR87Q9BY21 358 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 PRDM14Q9GZV8 571 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 TOLLIPQ9H0E2 274 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 OR5H1A6NKK0 313 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 PROB1E7EW31 1015 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 SPRY3O43610 288 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF610Q8N9Z0 462 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 M0R1X1 148 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 RPP30P78346 268 aaKnown RBP13.25□□□□□ -0.29
AP4E1-202ENST00000558439 HIST3H3Q16695 136 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 MYPOPQ86VE0 399 aaPredicted RBP13.25□□□□□ -0.29
AP4E1-202ENST00000558439 MRPL41Q8IXM3 137 aaKnown RBP13.25□□□□□ -0.29
AP4E1-202ENST00000558439 Q8IYB0 196 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 BOD1Q96IK1 185 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 CHD9Q3L8U1 2897 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 YIF1AO95070 293 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF83P51522 516 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 RND3P61587 244 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 FFAR4Q5NUL3 377 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 HIST1H2BAQ96A08 127 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 SARAFQ96BY9 339 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 SERTAD4Q9NUC0 356 aa13.25□□□□□ -0.29
AP4E1-202ENST00000558439 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
AP4E1-202ENST00000558439 TRBV6-7A0A0A0MS04 114 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF737O75373 536 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 HAND1O96004 215 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 FABP1P07148 127 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 ADCYAP1P18509 176 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 COX5AP20674 150 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 DEFA6Q01524 100 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 ACTR3CQ9C0K3 210 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 WFDC1Q9HC57 220 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 TREM2Q9NZC2 230 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 HEATR1Q9H583 2144 aaKnown RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 AP4M1O00189 453 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 OR2H2O95918 312 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 CLN8Q9UBY8 286 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 PITX3O75364 302 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 SLC25A6P12236 298 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 RNF212Q495C1 297 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 LRRC3CA6NJW4 275 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF705DP0CH99 300 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF705BP0CI00 300 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 NDUFB7P17568 137 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 KITLGP21583 273 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 EIF2S3P41091 472 aaKnown RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 SMIM21Q3B7S5 101 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 MOB1BQ7L9L4 216 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 FAM210BQ96KR6 192 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 LYRM2Q9NU23 88 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 AURKAIP1Q9NWT8 199 aaPredicted RBP13.24□□□□□ -0.29
AP4E1-202ENST00000558439 PROCRQ9UNN8 238 aa13.24□□□□□ -0.29
AP4E1-202ENST00000558439 CRYAAP02489 173 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 FABP4P15090 132 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 ERVS71-1P61550 626 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 RPL19P84098 196 aaKnown RBP13.23□□□□□ -0.29
AP4E1-202ENST00000558439 BTNL8Q6UX41 500 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 GGNQ86UU5 652 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 OR52L2PQ8NGH6 319 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 LRRC29Q8WV35 223 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 DOCK11Q5JSL3 2073 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 PRUNE2Q8WUY3 3088 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 CLDN34H7C241 214 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 RSPO1Q2MKA7 263 aaPredicted RBP13.23□□□□□ -0.29
AP4E1-202ENST00000558439 OR13D1Q8NGV5 346 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
AP4E1-202ENST00000558439 REPIN1Q9BWE0 567 aaKnown RBP13.23□□□□□ -0.29
AP4E1-202ENST00000558439 ZFP36L1Q07352 338 aaKnown RBP13.23□□□□□ -0.29
AP4E1-202ENST00000558439 A0A1B0GU03 582 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 OPN1MWP04001 364 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 OPN1MW2P0DN77 364 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 OPN1MW3P0DN78 364 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 MMP9P14780 707 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 UCP3P55916 312 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 SRSF4Q08170 494 aaKnown RBP13.22□□□□□ -0.29
AP4E1-202ENST00000558439 Q0VFX4 171 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 DEFB124Q8NES8 71 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 MSI2Q96DH6 328 aaKnown RBP13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ABHD14BQ96IU4 210 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF703Q9H7S9 590 aaPredicted RBP13.22□□□□□ -0.29
AP4E1-202ENST00000558439 KIAA1456Q9P272 454 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ABCA1O95477 2261 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 VSTM5A8MXK1 200 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 EIF3IQ13347 325 aaKnown RBP13.22□□□□□ -0.29
AP4E1-202ENST00000558439 HFEQ30201 348 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF343Q6P1L6 599 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ZNF880Q6PDB4 577 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms