RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 UFD1Q92890 307 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 NEDD4LQ96PU5 975 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 SULT4A1Q9BR01 284 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 TMEM59Q9BXS4 323 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 CCDC90BQ9GZT6 254 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 GHRLQ9UBU3 117 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 TPRKBQ9Y3C4 175 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 PLXNB1O43157 2135 aa9.43□□□□□ -0.9
HERC1-202ENST00000558324 LINC01548A6NM66 108 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 NUDT19A8MXV4 375 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 CA11O75493 328 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 UBBP0CG47 229 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 CHATP28329 748 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 HTR2CP28335 458 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 PPP1CCP36873 323 aaKnown RBP9.42□□□□□ -0.9
HERC1-202ENST00000558324 RPS25P62851 125 aaKnown RBP9.42□□□□□ -0.9
HERC1-202ENST00000558324 EBI3Q14213 229 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 IRF3Q14653 427 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 P2RY14Q15391 338 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 TMEM30BQ3MIR4 351 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 FOXB2Q5VYV0 432 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 C6orf201Q7Z4U5 140 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 FOXRED2Q8IWF2 684 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 Q8N6K4 173 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 MRAPQ8TCY5 172 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 PHYHIPQ92561 330 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 NICN1Q9BSH3 213 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 FAAP24Q9BTP7 215 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 MBNL3Q9NUK0 354 aaKnown RBP9.42□□□□□ -0.9
HERC1-202ENST00000558324 NECAP2Q9NVZ3 263 aa9.42□□□□□ -0.9
HERC1-202ENST00000558324 ERICH4A6NGS2 130 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 TXNL1O43396 289 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 RGS10O43665 173 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 MOSP00540 346 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 IGHG2P01859 326 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 GLAP06280 429 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 UCHL1P09936 223 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 SRMP19623 302 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 MYF6P23409 242 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 CD1BP29016 333 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 GPR12P47775 334 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 ZNF137PP52743 207 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
HERC1-202ENST00000558324 RPS27AP62979 156 aaKnown RBP9.41□□□□□ -0.9
HERC1-202ENST00000558324 SLC35B1P78383 322 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 UNC119Q13432 240 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 Q3ZCU0 254 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 MORN2Q502X0 79 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 C1orf100Q5SVJ3 147 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 Q6ZPA2 131 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 C18orf65Q6ZTR6 163 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 STPG2Q8N412 459 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 Q8N9W7 124 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 SETD6Q8TBK2 473 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 S1PR3Q99500 378 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 ABHD14AQ9BUJ0 271 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 PLGRKTQ9HBL7 147 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 CHMP1AQ9HD42 196 aaPredicted RBP9.41□□□□□ -0.9
HERC1-202ENST00000558324 LIN7CQ9NUP9 197 aaKnown RBP9.41□□□□□ -0.9
HERC1-202ENST00000558324 AURKAIP1Q9NWT8 199 aaPredicted RBP9.41□□□□□ -0.9
HERC1-202ENST00000558324 JPT1Q9UK76 154 aa9.41□□□□□ -0.9
HERC1-202ENST00000558324 SLC22A1O15245 554 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 SLC2A2P11168 524 aaPredicted RBP9.4□□□□□ -0.9
HERC1-202ENST00000558324 BLVRBP30043 206 aaPredicted RBP9.4□□□□□ -0.9
HERC1-202ENST00000558324 MAP2K4P45985 399 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 F2RL1P55085 397 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 LSAMPQ13449 338 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 IZUMO2Q6UXV1 221 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 OR2W3Q7Z3T1 314 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 REC114Q7Z4M0 266 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 KLHL30-AS1Q8NEE0 82 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 OR6M1Q8NGM8 313 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 KCNG3Q8TAE7 436 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 RASL11BQ9BPW5 248 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 MRPL20Q9BYC9 149 aaKnown RBP9.4□□□□□ -0.9
HERC1-202ENST00000558324 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 ABCG5Q9H222 651 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 DUSP21Q9H596 190 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 PLSCR3Q9NRY6 295 aa9.4□□□□□ -0.9
HERC1-202ENST00000558324 AK6Q9Y3D8 172 aaKnown RBP9.4□□□□□ -0.9
HERC1-202ENST00000558324 TGP01266 2768 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 A0A0A6YYD4 124 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 AP4M1O00189 453 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 LANCL1O43813 399 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 BPNT1O95861 308 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 CRHBPP24387 322 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 OR3A3P47888 321 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 MLLT11Q13015 90 aaPredicted RBP9.39□□□□□ -0.91
HERC1-202ENST00000558324 MMDQ15546 238 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 HMGN3Q15651 99 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 ETV3LQ6ZN32 361 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 TMEM91Q6ZNR0 172 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 ZNF554Q86TJ5 538 aa9.39□□□□□ -0.91
HERC1-202ENST00000558324 SVOPQ8N4V2 548 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms