RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 SH2D1BO14796 132 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 GSTZ1O43708 216 aaPredicted RBP6.09□□□□□ -1.43
SPG11-205ENST00000558080 CHST1O43916 411 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 IGKV1D-12P01611 117 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 IGHV1-8P0DP01 117 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 ARSBP15848 533 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 OR3A1P47881 315 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 MEF2CQ06413 473 aaPredicted RBP6.09□□□□□ -1.43
SPG11-205ENST00000558080 MADCAM1Q13477 382 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 SSX2Q16385 188 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 AANATQ16613 207 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 TMEM69Q5SWH9 247 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 LDLRAD2Q5SZI1 272 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 ZNF57Q68EA5 555 aaPredicted RBP6.09□□□□□ -1.43
SPG11-205ENST00000558080 CRIP3Q6Q6R5 217 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 TCF23Q7RTU1 214 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 TRAPPC6BQ86SZ2 158 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 C11orf44Q8N8P7 122 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 OR51D1Q8NGF3 324 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 OR51A2Q8NGJ7 313 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 OR4C13Q8NGP0 309 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 OR13D1Q8NGV5 346 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 FAM110DQ8TAY7 271 aaPredicted RBP6.09□□□□□ -1.43
SPG11-205ENST00000558080 PTX4Q96A99 478 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 PHF21AQ96BD5 680 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 PPP1R14BQ96C90 147 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 CPNE2Q96FN4 548 aaPredicted RBP6.09□□□□□ -1.43
SPG11-205ENST00000558080 ZNF714Q96N38 554 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 ABHD1Q96SE0 405 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 THAP7Q9BT49 309 aaPredicted RBP6.09□□□□□ -1.43
SPG11-205ENST00000558080 DIABLOQ9NR28 239 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 ING3Q9NXR8 418 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 FBLN5Q9UBX5 448 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 GLS2Q9UI32 602 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 HILPDAQ9Y5L2 63 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
SPG11-205ENST00000558080 TMEM272A0A1B0GTI8 110 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 FUOMA2VDF0 154 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 CENPXA8MT69 81 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 ODF3BA8MYP8 253 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 GABARAPH6UMI1 98 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 MGST3O14880 152 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 LYRM1O43325 122 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 XRCC3O43542 346 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 MMP23AO75900 390 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 SCGNO76038 276 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 OR2H2O95918 312 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 RBP4P02753 201 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 HCKP08631 526 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 UBBP0CG47 229 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 TMEM225BP0DP42 221 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 VSIG10L2P0DP72 767 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 ZNF44P15621 663 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 CDK2P24941 298 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 ZNF93P35789 620 aaPredicted RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 KIR2DS4P43632 304 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 BCAP31P51572 246 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 EFNB2P52799 333 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 P2RX3P56373 397 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 TAS2R20P59543 309 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 AP3S2P59780 193 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 AESQ08117 197 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 HABP2Q14520 560 aaPredicted RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 HERPUD1Q15011 391 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 ZNF146Q15072 292 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 C2orf76Q3KRA6 126 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 ZNF626Q68DY1 528 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 CCBE1Q6UXH8 406 aaPredicted RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 Q6ZTK2 550 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 REC114Q7Z4M0 266 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 TMEM219Q86XT9 240 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 LYPD6Q86Y78 171 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 DTX3Q8N9I9 347 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 OR11H6Q8NGC7 330 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 OR2T6Q8NHC8 308 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 ENKURQ8TC29 256 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 SMIM4Q8WVI0 70 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 TRIM63Q969Q1 353 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 SPSB1Q96BD6 273 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 MALSU1Q96EH3 234 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 C7orf50Q9BRJ6 194 aaKnown RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 C11orf54Q9H0W9 315 aaPredicted RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 SEBOXQ9HB31 216 aaPredicted RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 RAB18Q9NP72 206 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 RAB22AQ9UL26 194 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 MRPS7Q9Y2R9 242 aaKnown RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 TBL2Q9Y4P3 447 aaKnown RBP6.08□□□□□ -1.44
SPG11-205ENST00000558080 LINC00312Q9Y6C7 94 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 SESN1Q9Y6P5 492 aa6.08□□□□□ -1.44
SPG11-205ENST00000558080 IGHV2-26A0A0B4J1V2 119 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 LINC00854A0A1B0GVQ3 168 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 FAM240BA0A1B0GVZ2 78 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 FAM172BPA6NC97 362 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 METTL21EPA6NDL7 271 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 A6NDX4 124 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 DEGS1O15121 323 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 LDLRAD4O15165 306 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 PLA2G10O15496 165 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 KDM4BO94953 1096 aa6.07□□□□□ -1.44
SPG11-205ENST00000558080 CSF1P09603 554 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms