RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 PARP12Q9H0J9 701 aaKnown RBP10.43□□□□□ -0.74
SHMT2-227ENST00000557269 OR2S2Q9NQN1 319 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 NUP50Q9UKX7 468 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 ANAPC10Q9UM13 185 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 PSG11Q9UQ72 335 aa10.43□□□□□ -0.74
SHMT2-227ENST00000557269 FN1P02751 2386 aaKnown RBP10.42□□□□□ -0.74
SHMT2-227ENST00000557269 ODF3BA8MYP8 253 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 NPFFO15130 113 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 TPPPO94811 219 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 ARG1P05089 322 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 LPLP06858 475 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 PAX6P26367 422 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 SRP14P37108 136 aaKnown RBP10.42□□□□□ -0.74
SHMT2-227ENST00000557269 GNG10P50151 68 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 HTD2P86397 168 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF79Q15937 498 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 MORN2Q502X0 79 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 GPR157Q5UAW9 335 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF626Q68DY1 528 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 FAM131AQ6UXB0 335 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 LHFPL4Q7Z7J7 247 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 LYSMD2Q8IV50 215 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF439Q8NDP4 499 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 BEST4Q8NFU0 473 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 OR52M1Q8NGK5 317 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 CLEC7AQ9BXN2 247 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 SCPEP1Q9HB40 452 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 PTTG2Q9NZH5 202 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 GNG12Q9UBI6 72 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 KLK11Q9UBX7 282 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 SLC23A1Q9UHI7 598 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 ANXA10Q9UJ72 324 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 CDC42EP3Q9UKI2 254 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 MGAT4AQ9UM21 535 aa10.42□□□□□ -0.74
SHMT2-227ENST00000557269 TEP1Q99973 2627 aaKnown RBP10.41□□□□□ -0.74
SHMT2-227ENST00000557269 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 A0A0U1RQK1 487 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 MDFIC2A0A1B0GVS7 189 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 J3QR06 171 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 BET1O15155 118 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 CRLF1O75462 422 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 IGLV1-47P01700 117 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 NAT1P18440 290 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 HNF1AP20823 631 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 SAA4P35542 130 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 ETV6P41212 452 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 KIR2DS4P43632 304 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 CBX5P45973 191 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 KIR2DS1Q14954 304 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 CT45A1Q5HYN5 189 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 PYHIN1Q6K0P9 492 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 DYNAPQ8N1N2 210 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 OR4P4Q8NGL7 312 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 OR4A4PQ8NGN8 299 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 OR9G1Q8NH87 305 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 CT45A3Q8NHU0 189 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 CABLES2Q9BTV7 478 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 IFT46Q9NQC8 304 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 JPT1Q9UK76 154 aa10.41□□□□□ -0.74
SHMT2-227ENST00000557269 TRBV6-7A0A0A0MS04 114 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 SULT1C2O00338 296 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 CTDSPLO15194 276 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 LANCL1O43813 399 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 EPHA1P21709 976 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 CEACAM6P40199 344 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 CHRFAM7AQ494W8 412 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 STEAP3Q658P3 488 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 LURAP1LQ8IV03 231 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 FCAMRQ8WWV6 532 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-227ENST00000557269 MS4A7Q9GZW8 240 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-227ENST00000557269 RAB9BQ9NP90 201 aa10.4□□□□□ -0.74
SHMT2-227ENST00000557269 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-227ENST00000557269 LY6LH3BQJ8 138 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 BUB1B-PAK6H3BSN5 160 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 GABARAPH6UMI1 98 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 TOR1AO14656 332 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 GSTZ1O43708 216 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-227ENST00000557269 YPEL1O60688 119 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 PMP2P02689 132 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 SRD5A1P18405 259 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 ZBTB25P24278 435 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 DIAPH2-AS1Q14236 149 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 HLA-DRB5Q30154 266 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 DEFB112Q30KQ8 113 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 TMEM30BQ3MIR4 351 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 MIDNQ504T8 468 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 PYDC2Q56P42 97 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 LDLRAD3Q86YD5 345 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 MFSD4AQ8N468 514 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 TEX29Q8N6K0 151 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 BEND2Q8NDZ0 799 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 ZNF596Q8TC21 504 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 C15orf40Q8WUR7 153 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 SMIM4Q8WVI0 70 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 YPEL2Q96QA6 119 aa10.39□□□□□ -0.75
SHMT2-227ENST00000557269 SDHCQ99643 169 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms