RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 FAM90A12PA8MX19 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A5PA8MXJ8 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A23PA8MXZ1 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 C9J4A7 227 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A15PP0C7V4 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A13PP0C7W8 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A14PP0C7W9 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A24PP0C7X0 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 RNF224P0DH78 156 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 GDF1P27539 372 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 OR8G1Q15617 311 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 CEACAM21Q3KPI0 293 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 RIPPLY2Q5TAB7 128 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 COLCA1Q6ZS62 124 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 OR2Y1Q8NGV0 311 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 PSMF1Q92530 271 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 NOSIPQ9Y314 301 aaKnown RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 TRAV24A0A0B4J272 114 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 PHOX2AO14813 284 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 SYNGR2O43760 224 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 MRPL33O75394 65 aaKnown RBP9.69□□□□□ -0.86
SRP54-213ENST00000556994 CTXN2P0C2S0 81 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 OTX2P32243 289 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 Q0VFX4 171 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 IL11RAQ14626 422 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 COL19A1Q14993 1142 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 SPANXN5Q5MJ07 72 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 LILRB2Q8N423 598 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 ZNF525Q8N782 197 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 OR10G4Q8NGN3 311 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 IL22RA2Q969J5 263 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 RAB40CQ96S21 281 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 HIST1H2BLQ99880 126 aa9.69□□□□□ -0.86
SRP54-213ENST00000556994 A0A1W2PR80 420 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 CD300LBA8K4G0 201 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 K7ESF4 209 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 TUBG1P23258 451 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 MDH2P40926 338 aaKnown RBP9.68□□□□□ -0.86
SRP54-213ENST00000556994 CXCL12P48061 93 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 RND2P52198 227 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 ADIRFQ15847 76 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 SRSF7Q16629 238 aaKnown RBP eCLIP9.68□□□□□ -0.86
SRP54-213ENST00000556994 HIPK2Q9H2X6 1198 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 UFSP2Q9NUQ7 469 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 RBM7Q9Y580 266 aaKnown RBP9.68□□□□□ -0.86
SRP54-213ENST00000556994 CYTIPO60759 359 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 RHBDL1O75783 438 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 IGLV2-14P01704 120 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 S100GP29377 79 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 IL2RGP31785 369 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 FOLR3P41439 243 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 PNRC1Q12796 327 aaPredicted RBP9.68□□□□□ -0.86
SRP54-213ENST00000556994 RNPS1Q15287 305 aaKnown RBP9.68□□□□□ -0.86
SRP54-213ENST00000556994 LYSMD4Q5XG99 296 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 OR8G2PQ6IF36 304 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 OR4X1Q8NH49 305 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 SGCZQ96LD1 299 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 HIST1H2AAQ96QV6 131 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 OR4C12Q96R67 309 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 GAB2Q9UQC2 676 aa9.68□□□□□ -0.86
SRP54-213ENST00000556994 IGHV3-64DA0A0J9YX35 117 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 MAP1LC3B2A6NCE7 125 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 ZNF737O75373 536 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 DDTP30046 118 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 ERVS71-1P61550 626 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 TUSC5Q8IXB3 177 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 OR10V1Q8NGI7 309 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 MBD3L1Q8WWY6 194 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 RPUSD4Q96CM3 377 aaKnown RBP9.67□□□□□ -0.86
SRP54-213ENST00000556994 MAP1LC3BQ9GZQ8 125 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 VAX2Q9UIW0 290 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 DOCK11Q5JSL3 2073 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 NBEAQ8NFP9 2946 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 A0A087X0M5 115 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 UBE2L5PA0A1B0GUS4 154 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 A0A1B0GX30 115 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 SMCO3A2RU48 225 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 WDR1O75083 606 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 IGKV1D-33P01593 117 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 IGKV1-33P01594 117 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 CYC1P08574 325 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 RPS16P62249 146 aaKnown RBP9.67□□□□□ -0.86
SRP54-213ENST00000556994 TESK1Q15569 626 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 LRRC75BQ2VPJ9 315 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 SPINK14Q6IE38 97 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 SSX9Q7RTT3 188 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 C16orf82Q7Z2V1 217 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 SAXO1Q8IYX7 474 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 GATAD1Q8WUU5 269 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 SMIM7Q9BQ49 75 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 TMEM242Q9NWH2 141 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 DLL3Q9NYJ7 618 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 DNAJC13O75165 2243 aa9.67□□□□□ -0.86
SRP54-213ENST00000556994 URB1O60287 2271 aaKnown RBP9.67□□□□□ -0.86
SRP54-213ENST00000556994 TRBV24-1A0A075B6N3 115 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 OPN1MWP04001 364 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 CELA3AP09093 270 aa9.66□□□□□ -0.86
SRP54-213ENST00000556994 OPN1MW2P0DN77 364 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms