RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 HOGA1Q86XE5 327 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 FAM185AQ8N0U4 392 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 GAPTQ8N292 157 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PRR18Q8N4B5 295 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 GDPD1Q8N9F7 314 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 OR4D10Q8NGI6 311 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 OR1L1Q8NH94 360 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 RFESDQ8TAC1 157 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 SMIM4Q8WVI0 70 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 FCAMRQ8WWV6 532 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 CFHR4Q92496 578 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 H1FXQ92522 213 aaKnown RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TIMD4Q96H15 378 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PIMREGQ9BSJ6 248 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TINAGL1Q9GZM7 467 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PATZ1Q9HBE1 687 aaKnown RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 LPAR2Q9HBW0 351 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 Q9N2K0 584 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM160Q9NX00 188 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 SLC25A10Q9UBX3 287 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 MTFP1Q9UDX5 166 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 GLS2Q9UI32 602 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 TBC1D24Q9ULP9 559 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 ANAPC10Q9UM13 185 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 RBMX2Q9Y388 322 aaKnown RBP4.36□□□□□ -1.71
ATXN3-244ENST00000556898 PLCE1Q9P212 2302 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 DSCAMO60469 2012 aa4.36□□□□□ -1.71
ATXN3-244ENST00000556898 A0A096LNT2 108 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ANKRD20A5PA0PJZ0 165 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 TMEM30CPA0ZSE6 113 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ODAMA1E959 279 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SERPINE3A8MV23 424 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 C12orf77C9JDV5 145 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 MGST3O14880 152 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 CA11O75493 328 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 UPK1BO75841 260 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 RBBP9O75884 186 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SCGNO76038 276 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV3-7P01780 117 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 IGHV2-5P01817 119 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 CD3DP04234 171 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 LPLP06858 475 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF735P0CB33 412 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 OMGP23515 440 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 PTBP1P26599 531 aaKnown RBP eCLIP4.35□□□□□ -1.714e-18■■■■■ 40.6
ATXN3-244ENST00000556898 SSTR5P35346 364 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 GLP1RP43220 463 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 RANBP1P43487 201 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 RFX2P48378 723 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 P2RX3P56373 397 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 HLA-DRB3P79483 266 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 LCN2P80188 198 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 RBM39Q14498 530 aaKnown RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 GNMTQ14749 295 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 HERPUD1Q15011 391 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 FAM189A2Q15884 450 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 RNF151Q2KHN1 245 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 C17orf58Q2M2W7 97 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 LRRC10Q5BKY1 277 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 IGSF11Q5DX21 431 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 PRAMEF5Q5TYX0 476 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 WDR25Q64LD2 544 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SLC35E4Q6ICL7 350 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF880Q6PDB4 577 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 C16orf87Q6PH81 154 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 CLEC2AQ6UVW9 174 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 BTN2A1Q7KYR7 527 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 GDPD3Q7L5L3 318 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SLC36A1Q7Z2H8 476 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 MUC20Q8N307 709 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ZNF561Q8N587 486 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SPICQ8N5J4 248 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 BEST4Q8NFU0 473 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 OR8B3Q8NGG8 313 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 OR52L2PQ8NGH6 319 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 OR4C16Q8NGL9 310 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 BORCS5Q969J3 196 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 RBMXL1Q96E39 390 aaKnown RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 NEIL1Q96FI4 390 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 OR8B2Q96RD0 313 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 PARP12Q9H0J9 701 aaKnown RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 C11orf54Q9H0W9 315 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SEBOXQ9HB31 216 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SCPEP1Q9HB40 452 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 SPACA1Q9HBV2 294 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 HRASLSQ9HDD0 168 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 C12orf4Q9NQ89 552 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 IFT46Q9NQC8 304 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 MMP26Q9NRE1 261 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 OR1A1Q9P1Q5 309 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ZNRD1Q9P1U0 126 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 KAAG1Q9UBP8 84 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 LPAR3Q9UBY5 353 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 TRAPPC2LQ9UL33 140 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 ARID1AO14497 2285 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
ATXN3-244ENST00000556898 TRBV6-6A0A0A6YYG2 114 aa4.34□□□□□ -1.71
ATXN3-244ENST00000556898 A0A1W2PPE3 182 aa4.34□□□□□ -1.71
ATXN3-244ENST00000556898 TRDCB7Z8K6 153 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms