RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 OCM2P0CE71 109 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 CTSEP14091 401 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 CD99P14209 185 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 GADD45AP24522 165 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 C1DQ13901 141 aaKnown RBP1.96□□□□□ -2.1
SCFD1-221ENST00000556534 MESTQ5EB52 335 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 LDLRAD2Q5SZI1 272 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 HENMT1Q5T8I9 393 aaKnown RBP1.96□□□□□ -2.1
SCFD1-221ENST00000556534 TCF23Q7RTU1 214 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 DOLPP1Q86YN1 238 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 SGPP2Q8IWX5 399 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 KRTCAP2Q8N6L1 136 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 ZNF565Q8N9K5 539 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 OR8J2Q8NGG1 315 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 HAVCR2Q8TDQ0 301 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 KCTD4Q8WVF5 259 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 TNFAIP8L1Q8WVP5 186 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 YIPF5Q969M3 257 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 SEC22CQ9BRL7 303 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 TM2D3Q9BRN9 247 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 CDCA4Q9BXL8 241 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 OR2D2Q9H210 308 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 INIPQ9NRY2 104 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 SPANXB1Q9NS25 103 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-221ENST00000556534 FAM206AQ9NX38 181 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 USE1Q9NZ43 259 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.96□□□□□ -2.1
SCFD1-221ENST00000556534 OR51B4Q9Y5P0 310 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 CEP170Q5SW79 1584 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 CACNA1SQ13698 1873 aa1.96□□□□□ -2.1
SCFD1-221ENST00000556534 PRR14LQ5THK1 2151 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 OR5H14A6NHG9 310 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 C21orf140B9A014 251 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 K7ERS5 55 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 M0QZ92 97 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 ARL6IP5O75915 188 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 AHSA1O95433 338 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 PDYNP01213 254 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 TYMSP04818 313 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 S100A6P06703 90 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 PFN1P07737 140 aaKnown RBP1.95□□□□□ -2.1
SCFD1-221ENST00000556534 CXCL3P19876 107 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 MIPP30301 263 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 AGTR1P30556 359 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 SULT1A2P50226 295 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 ITGB3BPQ13352 177 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-221ENST00000556534 ZCWPW2Q504Y3 356 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 TRMT12Q53H54 448 aaKnown RBP1.95□□□□□ -2.1
SCFD1-221ENST00000556534 PDZD11Q5EBL8 140 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 EBLN2Q6P2I7 272 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 CYHR1Q6ZMK1 362 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 Q6ZRU5 148 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 DNAAF3Q8N9W5 541 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 TMEM75Q8N9X5 138 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 OR5K1Q8NHB7 308 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 RNF133Q8WVZ7 376 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 CMBLQ96DG6 245 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 C8orf76Q96K31 380 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 OR2V2Q96R30 315 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 MROQ9BYG7 248 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 GABARAPL1Q9H0R8 117 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 UBQLN4Q9NRR5 601 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 ICOSQ9Y6W8 199 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 CEP350Q5VT06 3117 aa1.95□□□□□ -2.1
SCFD1-221ENST00000556534 CHD5Q8TDI0 1954 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 H3BMM0 161 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 H3BQ85 93 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 CXCR6O00574 342 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 CRTAPO75718 401 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-221ENST00000556534 ATP5G1P05496 136 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 CXCL2P19875 107 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 CFL1P23528 166 aaKnown RBP1.94□□□□□ -2.1
SCFD1-221ENST00000556534 H2BFSP57053 126 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 OR11G2Q8NGC1 345 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 OR10D3Q8NH80 312 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 APOBEC3DQ96AK3 386 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-221ENST00000556534 UBE2WQ96B02 151 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 PACRGQ96M98 296 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-221ENST00000556534 DHRS9Q9BPW9 319 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 GNB1LQ9BYB4 327 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 DERL2Q9GZP9 239 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 C11orf49Q9H6J7 331 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 ZNF286AQ9HBT8 521 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 TMEM216Q9P0N5 145 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 POLR3HQ9Y535 204 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-221ENST00000556534 KDM6BO15054 1643 aa1.94□□□□□ -2.1
SCFD1-221ENST00000556534 CACNA1DQ01668 2161 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 NESP48681 1621 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 IGKV1D-37A0A075B6S9 117 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 IGHV3OR15-7A0A075B7D8 119 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 GOLGA6L4A6NEF3 574 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 ARGFXA6NJG6 315 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 LEUTXA8MZ59 168 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 SLC16A4O15374 487 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 STX10O60499 249 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 HLA-DRAP01903 254 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 LINC00614P0C842 121 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 INAFM2P0DMQ5 153 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 MLNP12872 115 aa1.93□□□□□ -2.1
SCFD1-221ENST00000556534 CTLA4P16410 223 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms