RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 RASL11BQ9BPW5 248 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 C9orf16Q9BUW7 83 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 TSSK6Q9BXA6 273 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 ANKRD60Q9BZ19 345 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 CHST6Q9GZX3 395 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 PBOV1Q9GZY1 135 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 RBM38Q9H0Z9 239 aaKnown RBP3.71□□□□□ -1.82
ATXN3-239ENST00000556315 GPR84Q9NQS5 396 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 GPR173Q9NS66 373 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 MTCH1Q9NZJ7 389 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF580Q9UK33 172 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 SAMD4AQ9UPU9 718 aaKnown RBP3.71□□□□□ -1.82
ATXN3-239ENST00000556315 VSIG4Q9Y279 399 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 AMMECR1Q9Y4X0 333 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-239ENST00000556315 AP4S1Q9Y587 144 aa3.71□□□□□ -1.82
ATXN3-239ENST00000556315 FAM230AA0A1W2PPH8 454 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 A0A1W2PPI3 338 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 FAM172BPA6NC97 362 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 FAM183AA6NL82 134 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 J3QR06 171 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 HSPA12AO43301 675 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 IGLV3-1P01715 115 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 IGF1P05019 195 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR8U9P0C7N5 309 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 SMIM18P0DKX4 95 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 NCK1P16333 377 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 ALOX5APP20292 161 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 RRM2P31350 389 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 PTGFRP43088 359 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR3A1P47881 315 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 GLIPR1P48060 266 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 RFX2P48378 723 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 CCR9P51686 369 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 MADCAM1Q13477 382 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF146Q15072 292 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 LPCAT4Q643R3 524 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 AWAT2Q6E213 333 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 DHFR2Q86XF0 187 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 Q8IYB0 196 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF565Q8N9K5 539 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 TSPAN14Q8NG11 270 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR8H1Q8NGG4 311 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR8D4Q8NGM9 314 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR2T10Q8NGZ9 312 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 EMG1Q92979 244 aaKnown RBP3.7□□□□□ -1.82
ATXN3-239ENST00000556315 DLX4Q92988 240 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-239ENST00000556315 CCDC124Q96CT7 223 aaKnown RBP3.7□□□□□ -1.82
ATXN3-239ENST00000556315 RCN3Q96D15 328 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 PYURFQ96I23 114 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 KCTD7Q96MP8 289 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 KCTD14Q9BQ13 255 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OSBPL10Q9BXB5 764 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 MROQ9BYG7 248 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR51V1Q9H2C8 321 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 OR51J1Q9H342 316 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 TUBA4BQ9H853 241 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 GNB4Q9HAV0 340 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 IL1RAPQ9NPH3 570 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 CMC2Q9NRP2 79 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 KRT84Q9NSB2 600 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 FAM206AQ9NX38 181 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 IL36RNQ9UBH0 155 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 ABCD2Q9UBJ2 740 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 HSPB7Q9UBY9 170 aa3.7□□□□□ -1.82
ATXN3-239ENST00000556315 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
ATXN3-239ENST00000556315 KBTBD11-OT1A0A1B0GTJ5 212 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 ODAMA1E959 279 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 FAM90A10PA6NDY2 464 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF729A6NN14 1252 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-239ENST00000556315 DHRS7CA6NNS2 312 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 C12orf77C9JDV5 145 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 LINC01619G3V211 115 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 NME4O00746 187 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 SH2D1BO14796 132 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 ARPC1BO15143 372 aaKnown RBP3.69□□□□□ -1.82
ATXN3-239ENST00000556315 SELENOFO60613 162 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF254O75437 659 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 TOMM40O96008 361 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 CYB5AP00167 134 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 GAPDHP04406 335 aaKnown RBP3.69□□□□□ -1.82
ATXN3-239ENST00000556315 CGB3P0DN86 165 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 CGB7P0DN87 165 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 NFYBP25208 207 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 FASP25445 335 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 SOX6P35712 828 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 RAB9AP51151 201 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 FUT6P51993 359 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 GNB1P62873 340 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 MS4A2Q01362 244 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 AESQ08117 197 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 DIAPH2-AS1Q14236 149 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 C17orf58Q2M2W7 97 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF829Q3KNS6 432 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-239ENST00000556315 SPIN3Q5JUX0 258 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 Q6ZSR3 168 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 SLC25A26Q70HW3 274 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 MOB3BQ86TA1 216 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 FAM58AQ8N1B3 248 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 Q8N6K4 173 aa3.69□□□□□ -1.82
ATXN3-239ENST00000556315 Q8N9W7 124 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms