RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 KIAA1456Q9P272 454 aa13.19□□□□□ -0.3
XRCC3-215ENST00000555964 AASSQ9UDR5 926 aa13.19□□□□□ -0.3
XRCC3-215ENST00000555964 MRPS28Q9Y2Q9 187 aaKnown RBP13.19□□□□□ -0.3
XRCC3-215ENST00000555964 TRAV41A0A0B4J266 112 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 I3L521 148 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 RGS11O94810 467 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 PPIFP30405 207 aaKnown RBP13.18□□□□□ -0.3
XRCC3-215ENST00000555964 GABPB1Q06547 395 aaPredicted RBP13.18□□□□□ -0.3
XRCC3-215ENST00000555964 CT45A1Q5HYN5 189 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 C10orf67Q8IYJ2 551 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 CT45A3Q8NHU0 189 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 SMIM19Q96E16 107 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 ABHD14AQ9BUJ0 271 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 C9orf16Q9BUW7 83 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 GNB4Q9HAV0 340 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 OR2S2Q9NQN1 319 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 PARP11Q9NR21 331 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 WSB1Q9Y6I7 421 aa13.18□□□□□ -0.3
XRCC3-215ENST00000555964 ATP6V0E1O15342 81 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 NBR2O15453 112 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 SAP30O75446 220 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 IGLV1-40P01703 118 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 GLAP06280 429 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 LYL1P12980 280 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 DCKP27707 260 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 VHLP40337 213 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 RAB9AP51151 201 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 ZNF134P52741 427 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 ACTBP60709 375 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 RAB12Q6IQ22 244 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 GAPTQ8N292 157 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 TCTEX1D1Q8N7M0 179 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 OR4K15Q8NH41 348 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 OR1L1Q8NH94 360 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 KLK15Q9H2R5 256 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 FGF20Q9NP95 211 aaPredicted RBP13.17□□□□□ -0.3
XRCC3-215ENST00000555964 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
XRCC3-215ENST00000555964 LOC100130705A0A1B0GUX0 176 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 A0A1W2PP11 408 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 MYL12AP19105 171 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 GNB1P62873 340 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 MED21Q13503 144 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 DOC2BQ14184 412 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 C5orf64Q2M2E5 130 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 SBSPONQ8IVN8 264 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 JAGN1Q8N5M9 183 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 OR5B12Q96R08 314 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 PEX16Q9Y5Y5 336 aa13.16□□□□□ -0.3
XRCC3-215ENST00000555964 LINC01619G3V211 115 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 G3V318 75 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 ARPC1BO15143 372 aaKnown RBP13.15□□□□□ -0.3
XRCC3-215ENST00000555964 GPX5O75715 221 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 SC5DO75845 299 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 OR8U9P0C7N5 309 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 GP9P14770 177 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 IGFBP3P17936 291 aaPredicted RBP13.15□□□□□ -0.3
XRCC3-215ENST00000555964 FSTP19883 344 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 KIAA0141Q14154 515 aaPredicted RBP13.15□□□□□ -0.3
XRCC3-215ENST00000555964 Q499Y3 187 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 MORN2Q502X0 79 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 PYHIN1Q6K0P9 492 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 LIN54Q6MZP7 749 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
XRCC3-215ENST00000555964 FAM71F2Q6NXP2 309 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 GLIPR1L1Q6UWM5 242 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 CDH26Q8IXH8 852 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 DCUN1D4Q92564 292 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 LRRC42Q9Y546 428 aa13.15□□□□□ -0.3
XRCC3-215ENST00000555964 IGHV7-81A0A0B4J1V7 117 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 OGG1O15527 345 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 FRMD6-AS1P0C7T7 363 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 FUT3P21217 361 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 BLVRBP30043 206 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-215ENST00000555964 HTD2P86397 168 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 LY6G6FQ5SQ64 297 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 MINDY2Q8NBR6 621 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 OR2AK2Q8NG84 335 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 MUL1Q969V5 352 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 MRPL20Q9BYC9 149 aaKnown RBP13.14□□□□□ -0.31
XRCC3-215ENST00000555964 ANKRD60Q9BZ19 345 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
XRCC3-215ENST00000555964 BABAM2Q9NXR7 383 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 RNF150Q9ULK6 438 aa13.14□□□□□ -0.31
XRCC3-215ENST00000555964 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-215ENST00000555964 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
XRCC3-215ENST00000555964 TRBV5-5A0A0J9YX44 114 aa13.13□□□□□ -0.31
XRCC3-215ENST00000555964 YPEL1O60688 119 aa13.13□□□□□ -0.31
XRCC3-215ENST00000555964 LGALS1P09382 135 aaKnown RBP13.13□□□□□ -0.31
XRCC3-215ENST00000555964 SPNP16150 400 aa13.13□□□□□ -0.31
XRCC3-215ENST00000555964 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms