RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KLF13Q9Y2Y9 288 aaPredicted RBP5.96□□□□□ -1.46
TDP1-213ENST00000555880 RNF115Q9Y4L5 304 aa5.96□□□□□ -1.46
TDP1-213ENST00000555880 LIPGQ9Y5X9 500 aa5.96□□□□□ -1.46
TDP1-213ENST00000555880 WSB1Q9Y6I7 421 aa5.96□□□□□ -1.46
TDP1-213ENST00000555880 COL27A1Q8IZC6 1860 aaPredicted RBP5.96□□□□□ -1.46
TDP1-213ENST00000555880 PCSK5Q92824 1860 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 TRAV1-1A0A0B4J248 108 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 CXorf65A6NEN9 183 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 J3QW42 95 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 AP4M1O00189 453 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 ZNHIT1O43257 154 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 TXNL1O43396 289 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 SCAF4O95104 1147 aaKnown RBP5.95□□□□□ -1.46
TDP1-213ENST00000555880 TMEM50AO95807 157 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 SRP19P09132 144 aaKnown RBP5.95□□□□□ -1.46
TDP1-213ENST00000555880 WNT2P09544 360 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 CD200P41217 278 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 FOXG1P55316 489 aaPredicted RBP5.95□□□□□ -1.46
TDP1-213ENST00000555880 B2MP61769 119 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 RUNX1Q01196 453 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 TMEM267Q0VDI3 215 aaPredicted RBP5.95□□□□□ -1.46
TDP1-213ENST00000555880 ICAM4Q14773 271 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 KHDC3LQ587J8 217 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 OR2T2Q6IF00 324 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 ZNF880Q6PDB4 577 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 FIP1L1Q6UN15 594 aaKnown RBP5.95□□□□□ -1.46
TDP1-213ENST00000555880 DBX2Q6ZNG2 339 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 C20orf204Q6ZNR8 217 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 P4HA3Q7Z4N8 544 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 C5orf24Q7Z6I8 188 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 SLC35E3Q7Z769 313 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 C1QL4Q86Z23 238 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 ZNF295-AS1Q8N0V1 137 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 CYB561D1Q8N8Q1 229 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 EDARADDQ8WWZ3 215 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 GPR146Q96CH1 333 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 RAB39BQ96DA2 213 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 ABHD14AQ9BUJ0 271 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 HIPK2Q9H2X6 1198 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 OR51I2Q9H344 312 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 C12orf49Q9H741 205 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 SIRT7Q9NRC8 400 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 PLA2G3Q9NZ20 509 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 CACNG5Q9UF02 275 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 TRAPPC2LQ9UL33 140 aa5.95□□□□□ -1.46
TDP1-213ENST00000555880 LNP1A1A4G5 178 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 B4DEV8 164 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 C9orf172C9J069 976 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 H3BP45 60 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 SYNGR2O43760 224 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 NQO2P16083 231 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 ZNF16P17020 682 aaPredicted RBP5.94□□□□□ -1.46
TDP1-213ENST00000555880 MAS1LP35410 378 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 WNT5AP41221 380 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 RPS10P46783 165 aaKnown RBP5.94□□□□□ -1.46
TDP1-213ENST00000555880 MEOX1P50221 254 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 PAX9P55771 341 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 SLC10A1Q14973 349 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 FBXW9Q5XUX1 488 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 HEPN1Q6WQI6 88 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 NUFIP2Q7Z417 695 aaKnown RBP5.94□□□□□ -1.46
TDP1-213ENST00000555880 LILRB2Q8N423 598 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 PRR18Q8N4B5 295 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 C17orf78Q8N4C9 275 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 OR10G4Q8NGN3 311 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 OR1K1Q8NGR3 316 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 CLDND2Q8NHS1 167 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 NANPQ8TBE9 248 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 PSENENQ9NZ42 101 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 FOXJ2Q9P0K8 574 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 OR1A1Q9P1Q5 309 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 PPP1R3CQ9UQK1 317 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 RFNGQ9Y644 331 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 R4GN57 208 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 A0A0G2JRQ6 117 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 SIRPB1O00241 398 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 SH2D1BO14796 132 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 NXPH2O95156 264 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 IFNA1P01562 189 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 SP1P08047 785 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 EIF2S3P41091 472 aaKnown RBP5.94□□□□□ -1.46
TDP1-213ENST00000555880 DLK1P80370 383 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 KIAA0141Q14154 515 aaPredicted RBP5.94□□□□□ -1.46
TDP1-213ENST00000555880 C3AR1Q16581 482 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 SPATA46Q5T0L3 261 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 ZNF497Q6ZNH5 498 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 MDP1Q86V88 176 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 ODF3L1Q8IXM7 274 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 MUCL1Q96DR8 90 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 FER1L6-AS2Q96M78 137 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 PSMG3Q9BT73 122 aaPredicted RBP5.94□□□□□ -1.46
TDP1-213ENST00000555880 SPRY4Q9C004 299 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 CDH20Q9HBT6 801 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 TMEM9BQ9NQ34 198 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 KCNIP1Q9NZI2 227 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 GNG13Q9P2W3 67 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 OR14J1Q9UGF5 321 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 PRSS50Q9UI38 385 aa5.94□□□□□ -1.46
TDP1-213ENST00000555880 DOCK7Q96N67 2140 aa5.93□□□□□ -1.46
TDP1-213ENST00000555880 VPS13AQ96RL7 3174 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms