RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 INO80EQ8NBZ0 244 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-213ENST00000555386 Q8TCH9 128 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 ST8SIA2Q92186 375 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 SLAMF9Q96A28 289 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF665Q9H7R5 613 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 PLEKHJ1Q9NW61 149 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF230Q9UIE0 474 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-213ENST00000555386 OOEPA6NGQ2 149 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 KRBOX1C9JBD0 128 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 FAM157AC9JC47 383 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 J3QT63 122 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 LGALS8O00214 317 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 SPRY1O43609 319 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 ANGPTL7O43827 346 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 NXPH2O95156 264 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 PTBP3O95758 552 aaKnown RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 HEXAP06865 529 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 IGHV4-31P0DP07 118 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 RPS2P15880 293 aaKnown RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 ZP3P21754 424 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 GLRA1P23415 457 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 NPY4RP50391 375 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 LCN2P80188 198 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 AADACL3Q5VUY0 350 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 ALKAL2Q6UX46 152 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 SLC25A26Q70HW3 274 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 KCTD9Q7L273 389 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 HSD17B13Q7Z5P4 300 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 RTN4RL2Q86UN3 420 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 ZSCAN4Q8NAM6 433 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 LRRC20Q8TCA0 184 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 CASTOR1Q8WTX7 329 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM230Q96A57 120 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 RTBDNQ9BSG5 229 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 ST6GALNAC5Q9BVH7 336 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 DNTTIP1Q9H147 329 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 ELL3Q9HB65 397 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 CHMP1AQ9HD42 196 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 SDHAF2Q9NX18 166 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 EHFQ9NZC4 300 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 C14orf166Q9Y224 244 aaKnown RBP8.22□□□□□ -1.09
PSEN1-213ENST00000555386 HIVEP2P31629 2446 aa8.22□□□□□ -1.09
PSEN1-213ENST00000555386 TRAV38-1A0A0B4J264 116 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 RNF222A6NCQ9 220 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 C5orf51A6NDU8 294 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A10PA6NDY2 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A18PA6NE21 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A16PA6NEW6 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A20PA6NIJ5 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A8PA6NJQ4 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A7PA6NKC0 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A22PA8MWA6 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A12PA8MX19 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A5PA8MXJ8 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A23PA8MXZ1 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM25EA8MYX2 175 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 CCSO14618 274 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 PHF1O43189 567 aaPredicted RBP8.21□□□□□ -1.09
PSEN1-213ENST00000555386 ADAM20O43506 726 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 HTR3BO95264 441 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 TGFAP01135 160 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 IGHV2-5P01817 119 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A15PP0C7V4 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A13PP0C7W8 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A14PP0C7W9 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A24PP0C7X0 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 PET100P0DJ07 73 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 LYL1P12980 280 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 GABRA2P47869 451 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 LMO4P61968 165 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM76BQ5HYJ3 339 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 CYB5R2Q6BCY4 276 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 DUX4L9Q6RFH8 374 aaPredicted RBP8.21□□□□□ -1.09
PSEN1-213ENST00000555386 FAM90A1Q86YD7 464 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 OR10K1Q8NGX5 313 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 RAB39BQ96DA2 213 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 MSI2Q96DH6 328 aaKnown RBP8.21□□□□□ -1.09
PSEN1-213ENST00000555386 SEC22AQ96IW7 307 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 CCL13Q99616 98 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 TLNRD1Q9H1K6 362 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 RASL12Q9NYN1 266 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 OR14J1Q9UGF5 321 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 ANXA10Q9UJ72 324 aa8.21□□□□□ -1.09
PSEN1-213ENST00000555386 KIAA2026Q5HYC2 2103 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 TEX13DA0A0J9YY54 714 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-213ENST00000555386 A8MXK9 166 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 SRRM5B3KS81 715 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 F8VVB4 439 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 F8VWA3 439 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 TMPRSS2O15393 492 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 SPDEFO95238 335 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 LHBP01229 141 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 CTSDP07339 412 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-213ENST00000555386 FGF2P09038 288 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 BCL3P20749 454 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 GABRR1P24046 479 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 CHATP28329 748 aa8.2□□□□□ -1.1
PSEN1-213ENST00000555386 CEBPDP49716 269 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-213ENST00000555386 ARPC4P59998 168 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms