RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR2W3Q7Z3T1 314 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 OR4K15Q8NH41 348 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
VRK1-204ENST00000555351 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 RIMS4Q9H426 269 aaPredicted RBP9.39□□□□□ -0.91
VRK1-204ENST00000555351 TAF9BQ9HBM6 251 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 LIN7CQ9NUP9 197 aaKnown RBP9.39□□□□□ -0.91
VRK1-204ENST00000555351 BLOC1S6Q9UL45 172 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 PLXNB1O43157 2135 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 A0A1W2PPE3 182 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 UBE2QL1A1L167 161 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 PSMB11A5LHX3 300 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 SLC17A2O00624 439 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 YPEL1O60688 119 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MPIG6BO95866 241 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MOSP00540 346 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 PSMD7P51665 324 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 INSL4Q14641 139 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MORN2Q502X0 79 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 CT45A1Q5HYN5 189 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MOB1BQ7L9L4 216 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MOB3BQ86TA1 216 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 FOXRED2Q8IWF2 684 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 LYG1Q8N1E2 194 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 FAM89BQ8N5H3 189 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 CT45A3Q8NHU0 189 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MRPL30Q8TCC3 161 aaKnown RBP9.38□□□□□ -0.91
VRK1-204ENST00000555351 FAM46BQ96A09 425 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 YPEL2Q96QA6 119 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MGLLQ99685 303 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
VRK1-204ENST00000555351 GON7Q9BXV9 100 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 ACOT13Q9NPJ3 140 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 OR2S2Q9NQN1 319 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 ZFP57Q9NU63 452 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 ZNF580Q9UK33 172 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 MGAT4AQ9UM21 535 aa9.38□□□□□ -0.91
VRK1-204ENST00000555351 TRBV6-6A0A0A6YYG2 114 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 IGHV3-43A0A0B4J1X8 118 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 G3V4G9 280 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 MRPS14O60783 128 aaKnown RBP9.37□□□□□ -0.91
VRK1-204ENST00000555351 DUS4LO95620 317 aaKnown RBP9.37□□□□□ -0.91
VRK1-204ENST00000555351 NAPSAO96009 420 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 IGHV3-43DP0DP04 118 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 VHLP40337 213 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 ZNF134P52741 427 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 SLC35B1P78383 322 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 UNC119Q13432 240 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 HMGN3Q15651 99 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 TBCEQ15813 527 aaPredicted RBP9.37□□□□□ -0.91
VRK1-204ENST00000555351 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 FAM71F2Q6NXP2 309 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 ZNF880Q6PDB4 577 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 SLC35E3Q7Z769 313 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 OR1L1Q8NH94 360 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 SGCDQ92629 289 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 GALMQ96C23 342 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 ABCG5Q9H222 651 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 GHITMQ9H3K2 345 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 PLSCR3Q9NRY6 295 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 ABRACLQ9P1F3 81 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 HSF4Q9ULV5 492 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 RAB26Q9ULW5 256 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 CMYA5Q8N3K9 4069 aa9.37□□□□□ -0.91
VRK1-204ENST00000555351 SERPINE3A8MV23 424 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 AP4M1O00189 453 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 ITGB1BP1O14713 200 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 SLC31A2O15432 143 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 PF4V1P10720 104 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 ARSBP15848 533 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 REG1BP48304 166 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 HNF4GQ14541 408 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 NKAPLQ5M9Q1 402 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 IZUMO2Q6UXV1 221 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 C6orf201Q7Z4U5 140 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 C1QL4Q86Z23 238 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 PRR18Q8N4B5 295 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 Q8N9W7 124 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 TMEM203Q969S6 136 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 SULT4A1Q9BR01 284 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 CHCHD6Q9BRQ6 235 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 FAAP24Q9BTP7 215 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 ABHD14AQ9BUJ0 271 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 LPAR5Q9H1C0 372 aa9.36□□□□□ -0.91
VRK1-204ENST00000555351 SH2D7A6NKC9 451 aaPredicted RBP9.35□□□□□ -0.91
VRK1-204ENST00000555351 NCBP2LA6PVI3 153 aaKnown RBP9.35□□□□□ -0.91
VRK1-204ENST00000555351 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 CD33P20138 364 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 GALP22466 123 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 BLVRBP30043 206 aaPredicted RBP9.35□□□□□ -0.91
VRK1-204ENST00000555351 GPR12P47775 334 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 LSAMPQ13449 338 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 OR10K2Q6IF99 312 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 ZNF833PQ6ZTB9 187 aa9.35□□□□□ -0.91
VRK1-204ENST00000555351 ZNF367Q7RTV3 350 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms