RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 SP5Q6BEB4 398 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-211ENST00000555055 MKXQ8IYA7 352 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 SLC25A40Q8TBP6 338 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 PARP12Q9H0J9 701 aaKnown RBP12.6□□□□□ -0.39
XRCC3-211ENST00000555055 IGKV1-6A0A0C4DH72 117 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 SMPD2O60906 423 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 PPYP01298 95 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 MPV17P39210 176 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 KIR2DL2P43627 348 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF266Q14584 549 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 C9orf152Q5JTZ5 239 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 FAM214BQ7L5A3 538 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF383Q8NA42 475 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 OR52M1Q8NGK5 317 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 IL1F10Q8WWZ1 152 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-211ENST00000555055 OPN3Q9H1Y3 402 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-211ENST00000555055 RBFOX3A6NFN3 312 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 SIRPB1O00241 398 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 HSD17B6O14756 317 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 ASCL1P50553 236 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF124Q15973 351 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 TBC1D28Q2M2D7 210 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF826PQ6ZT77 177 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 SYT3Q9BQG1 590 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
XRCC3-211ENST00000555055 TRAV24A0A0B4J272 114 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 OR13C7P0DN81 318 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 PPP1CCP36873 323 aaKnown RBP12.59□□□□□ -0.39
XRCC3-211ENST00000555055 FHITP49789 147 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 HERV-K104P61576 105 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 PPP1CBP62140 327 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 ELOBQ15370 118 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 LIAT1Q6ZQX7 453 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 OR5A2Q8NGI9 324 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 GP6Q9HCN6 339 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
XRCC3-211ENST00000555055 B4DEV8 164 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 H3BQ15 152 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
XRCC3-211ENST00000555055 FAM53AQ6NSI3 398 aaPredicted RBP12.58□□□□□ -0.4
XRCC3-211ENST00000555055 REC114Q7Z4M0 266 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 SLC35E3Q7Z769 313 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 OR10G4Q8NGN3 311 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 ABHD14BQ96IU4 210 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 TECTBQ96PL2 329 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 SH3BGRL3Q9H299 93 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 C11orf1Q9H5F2 150 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 CDH20Q9HBT6 801 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 PUS1Q9Y606 427 aaKnown RBP eCLIP12.58□□□□□ -0.4
XRCC3-211ENST00000555055 SRP19P09132 144 aaKnown RBP12.58□□□□□ -0.4
XRCC3-211ENST00000555055 PAX1P15863 534 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 GNRHRP30968 328 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 UCP3P55916 312 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 PKIAP61925 76 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 PSG7Q13046 419 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 GABRA6Q16445 453 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 LGI3Q8N145 548 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 FAM213BQ8TBF2 198 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 NANOS1Q8WY41 292 aaKnown RBP12.58□□□□□ -0.4
XRCC3-211ENST00000555055 RAB39BQ96DA2 213 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 C14orf144Q96I85 54 aa12.58□□□□□ -0.4
XRCC3-211ENST00000555055 TRAV17A0A0B4J275 112 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 PITX3O75364 302 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 CD82P27701 267 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 FABP6P51161 128 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 NDUFA6P56556 154 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 GNG3P63215 75 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 TMEM211Q6ICI0 200 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST3H2BBQ8N257 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 MOB3AQ96BX8 217 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 BOD1Q96IK1 185 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 Q9N2K0 584 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 DLL3Q9NYJ7 618 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 OR14J1Q9UGF5 321 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 PLCE1Q9P212 2302 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 WNT9BO14905 357 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 PPP1R2P9O14990 202 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 GPR37O15354 613 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BKO60814 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 IGHG3P01860 377 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BJP06899 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BOP23527 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BBP33778 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BDP58876 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST1H2BCP62807 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST2H2BEQ16778 126 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 ZNF506Q5JVG8 444 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-211ENST00000555055 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 DPPA3Q6W0C5 159 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 GAPTQ8N292 157 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 SCCPDHQ8NBX0 429 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 OR4D5Q8NGN0 318 aa12.57□□□□□ -0.4
XRCC3-211ENST00000555055 Q8WTZ3 238 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms