RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	OR9Q1	Q8NGQ5	310 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	OR4Q3	Q8NH05	313 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	FANK1	Q8TC84	345 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	LRRC29	Q8WV35	223 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	SGK3	Q96BR1	496 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	HOPX	Q9BPY8	73 aa	Predicted RBP	3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	KCTD14	Q9BQ13	255 aa	Predicted RBP	3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	C16orf95	Q9H693	158 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZNF446	Q9NWS9	450 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	VNN3	Q9NY84	501 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	ZNRD1	Q9P1U0	126 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	KAAG1	Q9UBP8	84 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	KLHDC2	Q9Y2U9	406 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	RHBDD3	Q9Y3P4	386 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	COMMD3-BMI1	R4GMX3	469 aa		3.97	□□□□□ -1.77
PSMC6-208	ENST00000554956	TRAV38-1	A0A0B4J264	116 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	XKRY2	A2RUG3	117 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	GGT3P	A6NGU5	568 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF593	O00488	134 aa	Predicted RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	CDIPT	O14735	213 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	NPFF	O15130	113 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	GMDS	O60547	372 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	GADD45G	O95257	159 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	REN	P00797	406 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	FCER2	P06734	321 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	CALB2	P22676	271 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	SAA4	P35542	130 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	CBX1	P83916	185 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	TSPAN31	Q12999	210 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	EXOSC2	Q13868	293 aa	Known RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	KLF5	Q13887	457 aa	Predicted RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	CRMP1	Q14194	572 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	HAGH	Q16775	308 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	DGUOK	Q16854	277 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	KPRP	Q5T749	579 aa	Predicted RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	LINC01590	Q5TEZ4	76 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	METTL11B	Q5VVY1	283 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	DNM1P34	Q6PK57	102 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	DRAM2	Q6UX65	266 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	HACD2	Q6Y1H2	254 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956		Q6ZRG5	221 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	ASRGL1	Q7L266	308 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	ARPIN	Q7Z6K5	226 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	CYP4Z1	Q86W10	505 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	SPAG16	Q8N0X2	631 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	C11orf42	Q8N5U0	333 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR1M1	Q8NGA1	313 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	PIFO	Q8TCI5	191 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	RORB	Q92753	470 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	SLAMF6	Q96DU3	332 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	PYURF	Q96I23	114 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	COPS4	Q9BT78	406 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	NSRP1	Q9H0G5	558 aa	Known RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	PPA2	Q9H2U2	334 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	SP140L	Q9H930	580 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	EFCAB1	Q9HAE3	211 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	ELL3	Q9HB65	397 aa	Predicted RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	TAS2R1	Q9NYW7	299 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	ONECUT1	Q9UBC0	465 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	CD300A	Q9UGN4	299 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	PRPF19	Q9UMS4	504 aa	Known RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	AP3M1	Q9Y2T2	418 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	FAM32A	Q9Y421	112 aa	Known RBP	3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	KPTN	Q9Y664	436 aa		3.96	□□□□□ -1.78
PSMC6-208	ENST00000554956	DHRS12	A0PJE2	317 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	AKR7A2	O43488	359 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	NDUFA2	O43678	99 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	CHST1	O43916	411 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	RHBDL1	O75783	438 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	ECD	O95905	644 aa	Predicted RBP	3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF823	P16415	610 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	SPI1	P17947	270 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	RRM2	P31350	389 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	EFNB2	P52799	333 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	ZNF121	P58317	390 aa	Predicted RBP	3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	DHODH	Q02127	395 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	CD300C	Q08708	224 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	P2RY14	Q15391	338 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	KCNJ8	Q15842	424 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	LY6E	Q16553	131 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	MICB	Q29980	383 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	LDLRAD2	Q5SZI1	272 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	STUM	Q69YW2	141 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	METAP1D	Q6UB28	335 aa	Predicted RBP	3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	DPY19L4	Q7Z388	723 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	LINC00518	Q8N0U6	118 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	DYNAP	Q8N1N2	210 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	PROKR2	Q8NFJ6	384 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	ANGPTL6	Q8NI99	470 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	GNPDA2	Q8TDQ7	276 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	RPL3L	Q92901	407 aa	Known RBP	3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	SPTSSA	Q969W0	71 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	REEP6	Q96HR9	211 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	GAFA1	Q96PS6	74 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	GON7	Q9BXV9	100 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	NDEL1	Q9GZM8	345 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	SLC22A4	Q9H015	551 aa		3.95	□□□□□ -1.78
PSMC6-208	ENST00000554956	TLNRD1	Q9H1K6	362 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms