RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 GSTT2BP0CG30 244 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 TAS2R46P59540 309 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 ZNF79Q15937 498 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 ABHD12Q8N2K0 398 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 GDPD1Q8N9F7 314 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 OR5AP2Q8NGF4 316 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 OR9G1Q8NH87 305 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 ZNF596Q8TC21 504 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 FAM216AQ8WUB2 273 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 MAFIPQ8WZ33 124 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 SNAPC3Q92966 411 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 SUCNR1Q9BXA5 334 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 GSX1Q9H4S2 264 aaPredicted RBP13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 TAS2R8Q9NYW2 309 aa13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 RBMX2Q9Y388 322 aaKnown RBP13.42□□□□□ -0.26
SPTLC2-203ENST00000554901 SONP18583 2426 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 NAV3Q8IVL0 2385 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 IGKV1D-8A0A087WSZ0 117 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 TRBV6-7A0A0A0MS04 114 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 IGHV1-69DA0A0B4J2H0 117 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 IGKV1-6A0A0C4DH72 117 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 HSPA12AO43301 675 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 IGHV1-69P01742 117 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 TBPP20226 339 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 PRRX1P54821 245 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 ARPC4P59998 168 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 DGCR2P98153 550 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 SCGB2A2Q13296 93 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 HERPUD1Q15011 391 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 CHRFAM7AQ494W8 412 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 MIDNQ504T8 468 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 ZNF626Q68DY1 528 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 PNKDQ8N490 385 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 BEND2Q8NDZ0 799 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 OR10J5Q8NHC4 309 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 UBALD1Q8TB05 177 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 AKIP1Q9NQ31 210 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 KLK11Q9UBX7 282 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 NUP50Q9UKX7 468 aa13.41□□□□□ -0.26
SPTLC2-203ENST00000554901 MEIS3P1A6NDR6 274 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 IGLV1-47P01700 117 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 LTC4SQ16873 150 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 MORN2Q502X0 79 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 ACTBL2Q562R1 376 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 Q8N402 240 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 LINC00311Q8N616 119 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 OR52L2PQ8NGH6 319 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 EDARADDQ8WWZ3 215 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 CREB3L1Q96BA8 519 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 SRRQ9GZT4 340 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 NECAP2Q9NVZ3 263 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 SLC23A1Q9UHI7 598 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 PSG11Q9UQ72 335 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 MTORP42345 2549 aa13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 NSD1Q96L73 2696 aaPredicted RBP13.4□□□□□ -0.26
SPTLC2-203ENST00000554901 J3QR06 171 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 TOR1AO14656 332 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 IGHV4-38-2P0DP08 117 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 COX7A1P24310 79 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 KLRD1Q13241 179 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 IGSF11Q5DX21 431 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 C9orf139Q6ZV77 190 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 MFSD4AQ8N468 514 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 BEX2Q9BXY8 128 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 GHITMQ9H3K2 345 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 TBL2Q9Y4P3 447 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 IGHV3-43A0A0B4J1X8 118 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 NPFFO15130 113 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 BET1O15155 118 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 CSF1P09603 554 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 IGHV3-43DP0DP04 118 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 SRP14P37108 136 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 CEACAM6P40199 344 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 OR3A3P47888 321 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 DLX1P56177 255 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 CDK10Q15131 360 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 MINOS1Q5TGZ0 78 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 SLC25A48Q6ZT89 311 aaKnown RBP13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 C5orf24Q7Z6I8 188 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 LYSMD2Q8IV50 215 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 TMEM229BQ8NBD8 167 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF439Q8NDP4 499 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 DEDD2Q8WXF8 326 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 GINS4Q9BRT9 223 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 THAP7Q9BT49 309 aaPredicted RBP13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 MMP28Q9H239 520 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 AMMECR1Q9Y4X0 333 aaPredicted RBP13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 MINOS1-NBL1R4GNA1 71 aa13.39□□□□□ -0.27
SPTLC2-203ENST00000554901 VGLL3A8MV65 326 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 ZNF736B4DX44 427 aaPredicted RBP13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 ARG1P05089 322 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 PPP1CCP36873 323 aaKnown RBP13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 RAB7AP51149 207 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 LGALS4P56470 323 aa13.38□□□□□ -0.27
SPTLC2-203ENST00000554901 TAS2R19P59542 299 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms