RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 NFYAP23511 347 aaPredicted RBP11.83□□□□□ -0.52
SHOX2-206ENST00000554685 CEACAM6P40199 344 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 CCR6P51684 374 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 LOXL1Q08397 574 aaPredicted RBP11.83□□□□□ -0.52
SHOX2-206ENST00000554685 Q3ZCU0 254 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 ZNF660Q6AZW8 331 aaPredicted RBP11.83□□□□□ -0.52
SHOX2-206ENST00000554685 BTNL3Q6UXE8 466 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 ZDHHC22Q8N966 263 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 UBALD1Q8TB05 177 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 CREB3L1Q96BA8 519 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 MOB3AQ96BX8 217 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 YPEL2Q96QA6 119 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 GFOD1Q9NXC2 390 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 RDH8Q9NYR8 311 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 OR1A1Q9P1Q5 309 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 MEX3AA1L020 520 aaKnown RBP11.82□□□□□ -0.52
SHOX2-206ENST00000554685 PGAM2P15259 253 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 AADACP22760 399 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 LUMP51884 338 aaPredicted RBP11.82□□□□□ -0.52
SHOX2-206ENST00000554685 UCP3P55916 312 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 DLX6P56179 175 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 LCN2P80188 198 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 LTC4SQ16873 150 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 PRAMEF5Q5TYX0 476 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 CCBE1Q6UXH8 406 aaPredicted RBP11.82□□□□□ -0.52
SHOX2-206ENST00000554685 C1orf122Q6ZSJ8 110 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 CENPSQ8N2Z9 138 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 OR52L2PQ8NGH6 319 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 ZFAND1Q8TCF1 268 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 RBM7Q9Y580 266 aaKnown RBP11.82□□□□□ -0.52
SHOX2-206ENST00000554685 KPTNQ9Y664 436 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 SESN1Q9Y6P5 492 aa11.82□□□□□ -0.52
SHOX2-206ENST00000554685 SPG11Q96JI7 2443 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 B4DSR2 109 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 SLC22A5O76082 557 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 IGHV1-8P0DP01 117 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 NFYBP25208 207 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 ZFP36P26651 326 aaKnown RBP11.81□□□□□ -0.52
SHOX2-206ENST00000554685 S100GP29377 79 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 RAB7AP51149 207 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 RAG2P55895 527 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 LOXL3P58215 753 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 AADACL3Q5VUY0 350 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 C5orf24Q7Z6I8 188 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 SLC38A6Q8IZM9 456 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 OR10V1Q8NGI7 309 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 OR13C8Q8NGS7 320 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 TOMM40LQ969M1 308 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 C1orf159Q96HA4 380 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 Q96MF0 132 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 TMPRSS13Q9BYE2 586 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 REG4Q9BYZ8 158 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 C20orf85Q9H1P6 137 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 NUDT15Q9NV35 164 aa11.81□□□□□ -0.52
SHOX2-206ENST00000554685 C14orf166Q9Y224 244 aaKnown RBP11.81□□□□□ -0.52
SHOX2-206ENST00000554685 ARID1AO14497 2285 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 IGHV3-43A0A0B4J1X8 118 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 OR5H14A6NHG9 310 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 FAM157AC9JC47 383 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 DHFRP00374 187 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 H2AFB2P0C5Z0 115 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 IGHV3-43DP0DP04 118 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 OMGP23515 440 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 PPP1CCP36873 323 aaKnown RBP11.8□□□□□ -0.52
SHOX2-206ENST00000554685 TAS2R31P59538 309 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 FXYD4P59646 89 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 GNMTQ14749 295 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 MSMO1Q15800 293 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 MORN2Q502X0 79 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 C8orf31Q8N9H6 132 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 OR2AK2Q8NG84 335 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 MARCH1Q8TCQ1 289 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 ZNF486Q96H40 463 aaPredicted RBP11.8□□□□□ -0.52
SHOX2-206ENST00000554685 MARVELD1Q9BSK0 173 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 SLC5A7Q9GZV3 580 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 FXYD6Q9H0Q3 95 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 GHITMQ9H3K2 345 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 METTL8Q9H825 291 aaKnown RBP11.8□□□□□ -0.52
SHOX2-206ENST00000554685 TACC2O95359 2948 aa11.8□□□□□ -0.52
SHOX2-206ENST00000554685 A0A087X0M5 115 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 A0A096LNT2 108 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 A0A1B0GX30 115 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 RNF223E7ERA6 249 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 INMT-MINDY4F8WBC2 141 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 ARPC1BO15143 372 aaKnown RBP11.79□□□□□ -0.52
SHOX2-206ENST00000554685 RLN1P04808 185 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 CTSDP07339 412 aaPredicted RBP11.79□□□□□ -0.52
SHOX2-206ENST00000554685 MSMBP08118 114 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 GATA3P23771 443 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
SHOX2-206ENST00000554685 PAX2Q02962 417 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 METTL11BQ5VVY1 283 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 CMTM1Q8IZ96 169 aa11.79□□□□□ -0.52
SHOX2-206ENST00000554685 SECTM1Q8WVN6 248 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 203.8 ms