RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ZFP41Q8N8Y5 198 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 OR10K1Q8NGX5 313 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 OR10X1Q8NGY0 326 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 RFESDQ8TAC1 157 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 OR14A2Q96R54 314 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 MCRIP2Q9BUT9 160 aaKnown RBP5.23□□□□□ -1.57
SLIRP-203ENST00000554074 TMED9Q9BVK6 235 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 GFOD1Q9NXC2 390 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 ZNF580Q9UK33 172 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 ING4Q9UNL4 249 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 NBEAL2Q6ZNJ1 2754 aa5.23□□□□□ -1.57
SLIRP-203ENST00000554074 PNMA8CA0A1B0GUJ8 204 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 SH2D7A6NKC9 451 aaPredicted RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 AIPO00170 330 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 AP4M1O00189 453 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 SDCBPO00560 298 aaPredicted RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 GEMIN2O14893 280 aaKnown RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 IGKV1D-33P01593 117 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 IGKV1-33P01594 117 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 IGHV3-7P01780 117 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 MT-ND4P03905 459 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 GLAP06280 429 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 SERPINA2P20848 420 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 CD1BP29016 333 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 MYCNOSP40205 109 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 THBS3P49746 956 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 GNG10P50151 68 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 GP2P55259 537 aaKnown RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 RPS25P62851 125 aaKnown RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 FABP5Q01469 135 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 DIAPH2-AS1Q14236 149 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 HES1Q14469 280 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 NEDD8Q15843 81 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 SLC22A6Q4U2R8 563 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 C9orf152Q5JTZ5 239 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ATAD3CQ5T2N8 411 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 C6orf183Q5T699 404 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 TRAT1Q6PIZ9 186 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ETV3LQ6ZN32 361 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 TMEM91Q6ZNR0 172 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 OR2W3Q7Z3T1 314 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 SLC35E3Q7Z769 313 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ZNF554Q86TJ5 538 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 LYPD6Q86Y78 171 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 CROCCP3Q8IVE0 287 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 MRPL41Q8IXM3 137 aaKnown RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 STPG2Q8N412 459 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 TMEM104Q8NE00 496 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 OR8H1Q8NGG4 311 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 OR2T10Q8NGZ9 312 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 DPF1Q92782 380 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 LEAP2Q969E1 77 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ARL11Q969Q4 196 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ST6GALNAC6Q969X2 333 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 EAF1Q96JC9 268 aaPredicted RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 KCTD7Q96MP8 289 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 BCL7BQ9BQE9 202 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 GON7Q9BXV9 100 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ABCG5Q9H222 651 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 LIN7CQ9NUP9 197 aaKnown RBP5.22□□□□□ -1.57
SLIRP-203ENST00000554074 ZNF581Q9P0T4 197 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 SCOCQ9UIL1 159 aa5.22□□□□□ -1.57
SLIRP-203ENST00000554074 KMT2CQ8NEZ4 4911 aaKnown RBP5.21□□□□□ -1.57
SLIRP-203ENST00000554074 TRAV8-7A0A075B6U6 113 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 TRAV39A0A0B4J263 110 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 SERPINE3A8MV23 424 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 MCRIP1C9JLW8 97 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 K7EIL1 84 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 SPINT2O43291 252 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 BPNT1O95861 308 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 MPIG6BO95866 241 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 MOSP00540 346 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 SMIM18P0DKX4 95 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 CD36P16671 472 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 CALRP27797 417 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 RPL5P46777 297 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 GPR12P47775 334 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 ALDH3B2P48448 385 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 SCAND1P57086 179 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 DCTN2Q13561 401 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 LTC4SQ16873 150 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 LY6G6FQ5SQ64 297 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 C1orf100Q5SVJ3 147 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 RAB12Q6IQ22 244 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 TEX38Q6PEX7 206 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 SLC25A48Q6ZT89 311 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 MOB3BQ86TA1 216 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF329Q86UD4 541 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 LRRTM1Q86UE6 522 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF695Q8IW36 515 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 RNF152Q8N8N0 203 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF439Q8NDP4 499 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 OR6M1Q8NGM8 313 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 OR13F1Q8NGS4 319 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 OR13C5Q8NGS8 318 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 NEK7Q8TDX7 302 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 RTN4IP1Q8WWV3 396 aaPredicted RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 TMEM203Q969S6 136 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 YIPF6Q96EC8 236 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms