RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CCDC182A6NF36 153 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 C9orf118A6NHY6 69 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 NPIPB11E5RHQ5 1161 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 ARPC2O15144 300 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SLC31A2O15432 143 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 RPP14O95059 124 aaKnown RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 CNIH1O95406 144 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SCGB1D1O95968 90 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SERPINA3P01011 423 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 HLA-DRB1P01911 266 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 HMGN1P05114 100 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 IGHV3-43DP0DP04 118 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 ATF1P18846 271 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 IL3RAP26951 378 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 CD81P60033 236 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 CXCR4P61073 352 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 NDPQ00604 133 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 EWSR1Q01844 656 aaKnown RBP eCLIP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 RAB40BQ12829 278 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 PDZK1IP1Q13113 114 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 LRRC36Q1X8D7 754 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 MICAQ29983 383 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 PAN3Q58A45 887 aaKnown RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 RSBN1Q5VWQ0 802 aaPredicted RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 LCN12Q6JVE5 192 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 CGB2Q6NT52 195 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 CD300LDQ6UXZ3 194 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 IL34Q6ZMJ4 242 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SLC16A12Q6ZSM3 486 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 LINC00311Q8N616 119 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 DEFB125Q8N687 156 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 DNAAF1Q8NEP3 725 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 OR10G2Q8NGC3 310 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 OR10A7Q8NGE5 316 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 OR5D18Q8NGL1 313 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 PLPPR1Q8TBJ4 325 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SPACA5Q96QH8 159 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 NR1H4Q96RI1 486 aaPredicted RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 CNN2Q99439 309 aaKnown RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 ANKRD60Q9BZ19 345 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 WFDC10AQ9H1F0 79 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SRD5A3Q9H8P0 318 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SLC25A19Q9HC21 320 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SPAG4Q9NPE6 437 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 FGFR1OP2Q9NVK5 253 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 ETAA1Q9NY74 926 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SIGLEC8Q9NYZ4 499 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 MRM2Q9UI43 246 aaKnown RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 MAGEL2Q9UJ55 1249 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 FOXA2Q9Y261 457 aaPredicted RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 KLK5Q9Y337 293 aaPredicted RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 FBXO7Q9Y3I1 522 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 SAMHD1Q9Y3Z3 626 aaKnown RBP4.06□□□□□ -1.76
HOXB3-213ENST00000552000 TMEM14AQ9Y6G1 99 aa4.06□□□□□ -1.76
HOXB3-213ENST00000552000 TRAV24A0A0B4J272 114 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 LOC107986453A0A1B0GWG9 222 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ZNF670-ZNF695F2Z2N8 137 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 H0YJX3 145 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ARPC1BO15143 372 aaKnown RBP4.05□□□□□ -1.76
HOXB3-213ENST00000552000 TPPPO94811 219 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 KDM4BO94953 1096 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ZP3P21754 424 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 PRKACBP22694 351 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 VHLP40337 213 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 SYNJ2BPP57105 145 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 TPPP2P59282 170 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ACTBP60709 375 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ACTR3P61158 418 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 CDK5R1Q15078 307 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 BAK1Q16611 211 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 C5orf64Q2M2E5 130 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 C19orf54Q5BKX5 351 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 LGALS9CQ6DKI2 356 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 FAHD1Q6P587 224 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 SLC35F2Q8IXU6 374 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 RDH10Q8IZV5 341 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 Q8N402 240 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ARL6IP6Q8N6S5 226 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 OR9G4Q8NGQ1 327 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ABHD5Q8WTS1 349 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 RGP1Q92546 391 aaPredicted RBP4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ARL11Q969Q4 196 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 TMEM106AQ96A25 262 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 RNF125Q96EQ8 232 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ADAT3Q96EY9 351 aaPredicted RBP4.05□□□□□ -1.76
HOXB3-213ENST00000552000 RITA1Q96K30 269 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 MS4A10Q96PG2 267 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 FEVQ99581 238 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 NEURL2Q9BR09 285 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 ZNF251Q9BRH9 671 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 OVOL2Q9BRP0 275 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 BARHL1Q9BZE3 327 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 NCOR1P1Q9H4R4 102 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 REEP1Q9H902 201 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 NEK6Q9HC98 313 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 FAM118AQ9NWS6 357 aa4.05□□□□□ -1.76
HOXB3-213ENST00000552000 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
HOXB3-213ENST00000552000 A0A0J9YWU9 116 aa4.04□□□□□ -1.76
HOXB3-213ENST00000552000 OR11H12B2RN74 326 aa4.04□□□□□ -1.76
HOXB3-213ENST00000552000 SDCBPO00560 298 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms