RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SP1P08047 785 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 CELA2BP08218 269 aaPredicted RBP13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 PMELP40967 661 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 RAC3P60763 192 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 OR1C1Q15619 314 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 PLPPR5Q32ZL2 321 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 FDX2Q6P4F2 183 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 OR10D3Q8NH80 312 aa13.77□□□□□ -0.21
RBFOX1-212ENST00000550418 SLC22A20A6NK97 555 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 SMIM8Q96KF7 97 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 ZDHHC8Q9ULC8 765 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 IL2RAP01589 272 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 RAB7AP51149 207 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 OR52M1Q8NGK5 317 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 BOD1Q96IK1 185 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 NEUROG3Q9Y4Z2 214 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 RPL13AP40429 203 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 KIR2DS2P43631 304 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 VMA21Q3ZAQ7 101 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 SPNS3Q6ZMD2 512 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2D3Q8NGH3 330 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 SOD3P08294 240 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 G6PCP35575 357 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 MPLP40238 635 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 RBM11P57052 281 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 Q1RN00 199 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 OR4S2Q8NH73 311 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2T6Q8NHC8 308 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 NUDT16L1Q9BRJ7 211 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 AAMDCQ9H7C9 122 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 WIPI2Q9Y4P8 454 aa13.76□□□□□ -0.21
RBFOX1-212ENST00000550418 IGHV1OR21-1A0A087WYE8 117 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 ISLRO14498 428 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 RAB29O14966 203 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 ZP4Q12836 540 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 PMCHL1Q16048 86 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 TXNDC17Q9BRA2 123 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 A0A0U1RQV5 110 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 SMPD2O60906 423 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 AGAP20933 346 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 MFAP2P55001 183 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 IER2Q9BTL4 223 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 SARGQ9BW04 601 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 HSPB8Q9UJY1 196 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 PCOLCE2Q9UKZ9 415 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 ZBTB34Q8NCN2 500 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 APOBEC4Q8WW27 367 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 MOB3AQ96BX8 217 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 WFIKKN1Q96NZ8 548 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 OR2V2Q96R30 315 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 UNC13CQ8NB66 2214 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 TRAV39A0A0B4J263 110 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 HAND1O96004 215 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 PDPNQ86YL7 162 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 TAF15Q92804 592 aaKnown RBP eCLIP13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 GNB4Q9HAV0 340 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 OR6C3Q9NZP0 311 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 CLN8Q9UBY8 286 aa13.75□□□□□ -0.21
RBFOX1-212ENST00000550418 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 H0Y980 276 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 THY1P04216 161 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 SF3B5Q9BWJ5 86 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 P01737 135 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 PRSS1P07477 247 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 IL36GQ9NZH8 169 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 FOXS1O43638 330 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 CA11O75493 328 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 RPL11P62913 178 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 SLC35B1P78383 322 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 DHRS13Q6UX07 377 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 OR4F17Q8NGA8 305 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 TM4SF19Q96DZ7 209 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 TMEM204Q9BSN7 226 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 GAGE10A6NGK3 116 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 TMEM14DPA8MWL7 114 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 RHBDL1O75783 438 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 SPINK2P20155 84 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 SRD5A2P31213 254 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 GABRA6Q16445 453 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 ZNF506Q5JVG8 444 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 C12orf54Q6X4T0 127 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 C1orf210Q8IVY1 113 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 IL19Q9UHD0 177 aa13.74□□□□□ -0.21
RBFOX1-212ENST00000550418 CORTO00230 105 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 HIST1H1EP10412 219 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 HIST1H1BP16401 226 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 LYRM7Q5U5X0 104 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 CD1BP29016 333 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 GNG10P50151 68 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 CARFQ8N187 725 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 ZNF638Q14966 1978 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 CNOT1A5YKK6 2376 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 LRRC3CA6NJW4 275 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 UBE2CO00762 179 aa13.73□□□□□ -0.21
RBFOX1-212ENST00000550418 ORM2P19652 201 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms