RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 NEDD4LQ96PU5 975 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 ANKRD60Q9BZ19 345 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 ISYNA1Q9NPH2 558 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 LRRC42Q9Y546 428 aa14.77□□□□□ -0.05
CHMP1A-207ENST00000549328 SLC31A2O15432 143 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 CHATP28329 748 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 RPS27AP62979 156 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 TPBGQ13641 420 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 PRR18Q8N4B5 295 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 OR8H1Q8NGG4 311 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 MRPL30Q8TCC3 161 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 UFD1Q92890 307 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 TMEM59Q9BXS4 323 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 OR2S2Q9NQN1 319 aa14.76□□□□□ -0.05
CHMP1A-207ENST00000549328 IGHV3-72A0A0B4J1Y9 119 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 NCBP2LA6PVI3 153 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 SERPINE3A8MV23 424 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 SLC22A1O15245 554 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 RGS10O43665 173 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 CD33P20138 364 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 HTR2CP28335 458 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 HTD2P86397 168 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 TRAM1Q15629 374 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 MORN2Q502X0 79 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 LIPKQ5VXJ0 399 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 SLC35E3Q7Z769 313 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 COMMD1Q8N668 190 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 OR10V1Q8NGI7 309 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 TM2D1Q9BX74 207 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 VCX3BQ9H321 246 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 LIN7CQ9NUP9 197 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 JPT1Q9UK76 154 aa14.75□□□□□ -0.05
CHMP1A-207ENST00000549328 LANCL1O43813 399 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 MOSP00540 346 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 PF4P02776 101 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 PSMA1P25786 263 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 QRFPP83859 136 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 NKAPLQ5M9Q1 402 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 LY6G6FQ5SQ64 297 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 OR10K2Q6IF99 312 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 ZNF329Q86UD4 541 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 FOXRED2Q8IWF2 684 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 OR6M1Q8NGM8 313 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 TMEM203Q969S6 136 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 NOL4LQ96MY1 436 aaPredicted RBP14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 ABCG5Q9H222 651 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 PLSCR3Q9NRY6 295 aa14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 PRKDCP78527 4128 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-207ENST00000549328 TMEM14DPA8MWL7 114 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 YPEL1O60688 119 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 BPNT1O95861 308 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 CRHBPP24387 322 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 SLC6A1P30531 599 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 SLC35B1P78383 322 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 MLLT11Q13015 90 aaPredicted RBP14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 UNC119Q13432 240 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 KHDC1LQ5JSQ8 128 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 TMEM91Q6ZNR0 172 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 PRSS48Q7RTY5 328 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 Q8N9W7 124 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 GALMQ96C23 342 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 YPEL2Q96QA6 119 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 SULT4A1Q9BR01 284 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 FAAP24Q9BTP7 215 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 ZFP57Q9NU63 452 aa14.73□□□□□ -0.05
CHMP1A-207ENST00000549328 ZNF736B4DX44 427 aaPredicted RBP14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 AP4M1O00189 453 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 ARL6IP5O75915 188 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 RGS11O94810 467 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 HSMCR30P0CW71 290 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 CPEP16870 476 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 HSPA13P48723 471 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 C6orf201Q7Z4U5 140 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 STPG2Q8N412 459 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 PHF21AQ96BD5 680 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 CYYR1Q96J86 154 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 S1PR3Q99500 378 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 GON7Q9BXV9 100 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 NECAP2Q9NVZ3 263 aa14.72□□□□□ -0.05
CHMP1A-207ENST00000549328 SLC17A2O00624 439 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 DUS4LO95620 317 aaKnown RBP14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 NAPSAO96009 420 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 BLVRBP30043 206 aaPredicted RBP14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 GPR12P47775 334 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 RPL23AP62750 156 aaKnown RBP14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 HMGN3Q15651 99 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 OR2W3Q7Z3T1 314 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 OR52L2PQ8NGH6 319 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 RCC1LQ96I51 464 aaKnown RBP14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 MGLLQ99685 303 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 RASL11BQ9BPW5 248 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 ABHD14AQ9BUJ0 271 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 CCDC90BQ9GZT6 254 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 ABRACLQ9P1F3 81 aa14.71□□□□□ -0.05
CHMP1A-207ENST00000549328 LINC01548A6NM66 108 aa14.7□□□□□ -0.06
CHMP1A-207ENST00000549328 PRB2P02812 416 aaPredicted RBP14.7□□□□□ -0.06
CHMP1A-207ENST00000549328 IGLL1P15814 213 aa14.7□□□□□ -0.06
CHMP1A-207ENST00000549328 ARSBP15848 533 aa14.7□□□□□ -0.06
CHMP1A-207ENST00000549328 PPP1CCP36873 323 aaKnown RBP14.7□□□□□ -0.06
CHMP1A-207ENST00000549328 RANBP1P43487 201 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms