RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 LINC00311Q8N616 119 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 RNF152Q8N8N0 203 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 ZFP41Q8N8Y5 198 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 SETD9Q8NE22 299 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 CT45A3Q8NHU0 189 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 CASTOR1Q8WTX7 329 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 GGHQ92820 318 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 GHSRQ92847 366 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 SMIM19Q96E16 107 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 RITA1Q96K30 269 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 ISYNA1Q9NPH2 558 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 PARP11Q9NR21 331 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 GNG12Q9UBI6 72 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 TRAPPC2LQ9UL33 140 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 RYR2Q92736 4967 aa9.29□□□□□ -0.92
TRAFD1-205ENST00000548277 TRBV5-5A0A0J9YX44 114 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 I3L521 148 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 ATP6V0E1O15342 81 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 MT-ND4P03905 459 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 OR8U8P0C7N1 319 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 IGFBP3P17936 291 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 RBM11P57052 281 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 PAX5Q02548 391 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 ST3GAL4Q11206 333 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 MED21Q13503 144 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 RIPK1Q13546 671 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 SLC22A6Q4U2R8 563 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 SYT6Q5T7P8 510 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 SLC25A48Q6ZT89 311 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 PACRGLQ8N7B6 248 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 OR52M1Q8NGK5 317 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 OR1L1Q8NH94 360 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 DLX4Q92988 240 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 CYYR1Q96J86 154 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 ZNF184Q99676 751 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 ZMAT4Q9H898 229 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 IL36GQ9NZH8 169 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 VSIG4Q9Y279 399 aa9.28□□□□□ -0.92
TRAFD1-205ENST00000548277 TNCP24821 2201 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 TRAV8-7A0A075B6U6 113 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 PNMA8CA0A1B0GUJ8 204 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 A0A1W2PPK0 400 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 MAGEA13PA6NCF6 341 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 TRIM64CA6NLI5 447 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 C12orf77C9JDV5 145 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 ORC5O43913 435 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 GPX5O75715 221 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 IGF1P05019 195 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 GP9P14770 177 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 PPIFP30405 207 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 VHLP40337 213 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 RAB9AP51151 201 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 INSL3P51460 131 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 RPS11P62280 158 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 RCN1Q15293 331 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 Q499Y3 187 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 YIF1BQ5BJH7 314 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 NHLRC3Q5JS37 347 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 HAPLN4Q86UW8 402 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 ZNF429Q86V71 674 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 STX19Q8N4C7 294 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 ZNF485Q8NCK3 441 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 OR8H1Q8NGG4 311 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 PGLYRP3Q96LB9 341 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 IFT22Q9H7X7 185 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 C8orf4Q9NR00 106 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 PAK1IP1Q9NWT1 392 aaPredicted RBP9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 CKLFQ9UBR5 152 aa9.27□□□□□ -0.93
TRAFD1-205ENST00000548277 TRAV41A0A0B4J266 112 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 UBE2QL1A1L167 161 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 EFCAB10A6NFE3 127 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 SPINT2O43291 252 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ZNF780AO75290 641 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 HBZP02008 142 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 GNAO1P09471 354 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 OR5H8P0DN80 308 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 GTF2F2P13984 249 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 LSAMPQ13449 338 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ECSCRQ19T08 205 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ADAMTSL5Q6ZMM2 481 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ZNF497Q6ZNH5 498 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 LINC00596Q86U02 117 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 JAGN1Q8N5M9 183 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 OR52L2PQ8NGH6 319 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 MUL1Q969V5 352 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 OR14A2Q96R54 314 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ZNF251Q9BRH9 671 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ANKRD60Q9BZ19 345 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 OR51J1Q9H342 316 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 ETAA1Q9NY74 926 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 A3GALT2U3KPV4 340 aa9.26□□□□□ -0.93
TRAFD1-205ENST00000548277 TRBV5-7A0A0A0MS05 114 aa9.25□□□□□ -0.93
TRAFD1-205ENST00000548277 IGHV7-81A0A0B4J1V7 117 aa9.25□□□□□ -0.93
TRAFD1-205ENST00000548277 LCE6AA0A183 80 aa9.25□□□□□ -0.93
TRAFD1-205ENST00000548277 A0A1W2PN81 502 aa9.25□□□□□ -0.93
TRAFD1-205ENST00000548277 MCRIP1C9JLW8 97 aa9.25□□□□□ -0.93
TRAFD1-205ENST00000548277 IGHV3-11P01762 117 aa9.25□□□□□ -0.93
TRAFD1-205ENST00000548277 MAS1P04201 325 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms