RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 DEFB121Q5J5C9 76 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 C6orf183Q5T699 404 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 FAM27D1Q5T7N8 215 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 UNQ9370/PRO34162Q6UXP9 181 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 COMMD1Q8N668 190 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 KLHL30-AS1Q8NEE0 82 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 OR51D1Q8NGF3 324 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 OR52L2PQ8NGH6 319 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 MRPL30Q8TCC3 161 aaKnown RBP10.48□□□□□ -0.73
CPSF6-204ENST00000547486 FAM46BQ96A09 425 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 RITA1Q96K30 269 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 HSPB9Q9BQS6 159 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 DCLRE1BQ9H816 532 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 OR2S2Q9NQN1 319 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
CPSF6-204ENST00000547486 MYL12BO14950 172 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 CASQ2O14958 399 aaPredicted RBP10.47□□□□□ -0.73
CPSF6-204ENST00000547486 GLAP06280 429 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 IL3RAP26951 378 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 GNMTQ14749 295 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 ACSM3Q53FZ2 586 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 OR10K2Q6IF99 312 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 TEX38Q6PEX7 206 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 LRRTM1Q86UE6 522 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 ZNF695Q8IW36 515 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 ODF3L1Q8IXM7 274 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 FAM71E2Q8N5Q1 922 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 TFAP2CQ92754 450 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 RAX2Q96IS3 184 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 RASL11BQ9BPW5 248 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 UQCC2Q9BRT2 126 aa10.47□□□□□ -0.73
CPSF6-204ENST00000547486 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 LANCL1O43813 399 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 PDCD6O75340 191 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 CA11O75493 328 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 SLC6A1P30531 599 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 PPP1CCP36873 323 aaKnown RBP10.46□□□□□ -0.73
CPSF6-204ENST00000547486 CFHR3Q02985 330 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 GPR50Q13585 617 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 TMEM30BQ3MIR4 351 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 C6orf141Q5SZD1 244 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 STEAP3Q658P3 488 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 TRAT1Q6PIZ9 186 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 NKAIN3Q8N8D7 197 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 SULT4A1Q9BR01 284 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 FAAP24Q9BTP7 215 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 ERGIC3Q9Y282 383 aa10.46□□□□□ -0.73
CPSF6-204ENST00000547486 PTGES3LE9PB15 166 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 H0YHG0 523 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 CCL24O00175 119 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 CDK1P06493 297 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 CHATP28329 748 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 HTR2CP28335 458 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 SOX6P35712 828 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 GABPB1Q06547 395 aaPredicted RBP10.45□□□□□ -0.74
CPSF6-204ENST00000547486 LSAMPQ13449 338 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 NKAPLQ5M9Q1 402 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 C1orf100Q5SVJ3 147 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 RNLSQ5VYX0 342 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 RNF152Q8N8N0 203 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 OR8H1Q8NGG4 311 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 TMED9Q9BVK6 235 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 KCNK15Q9H427 330 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 RAB9BQ9NP90 201 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 KCNIP1Q9NZI2 227 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 GHRLQ9UBU3 117 aa10.45□□□□□ -0.74
CPSF6-204ENST00000547486 LSM2Q9Y333 95 aaKnown RBP10.45□□□□□ -0.74
CPSF6-204ENST00000547486 TXNL1O43396 289 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 IGHG4P01861 327 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 IGF1P05019 195 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 CD37P11049 281 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 SLC2A2P11168 524 aaPredicted RBP10.44□□□□□ -0.74
CPSF6-204ENST00000547486 CNTFRP26992 372 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 MAPK3P27361 379 aaPredicted RBP10.44□□□□□ -0.74
CPSF6-204ENST00000547486 OR3A3P47888 321 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 CDX1P47902 265 aaPredicted RBP10.44□□□□□ -0.74
CPSF6-204ENST00000547486 RPS27AP62979 156 aaKnown RBP10.44□□□□□ -0.74
CPSF6-204ENST00000547486 HTD2P86397 168 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 UNC119Q13432 240 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 FOXE3Q13461 319 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 KIR2DS1Q14954 304 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 C11orf87Q6NUJ2 197 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 C6orf201Q7Z4U5 140 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 MS4A15Q8N5U1 240 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 NABP2Q9BQ15 211 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 NICN1Q9BSH3 213 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 GON7Q9BXV9 100 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 MRPL20Q9BYC9 149 aaKnown RBP10.44□□□□□ -0.74
CPSF6-204ENST00000547486 CST11Q9H112 138 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 NKX1-2Q9UD57 310 aaPredicted RBP10.44□□□□□ -0.74
CPSF6-204ENST00000547486 JPT1Q9UK76 154 aa10.44□□□□□ -0.74
CPSF6-204ENST00000547486 YPEL1O60688 119 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 ELANEP08246 267 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 UBBP0CG47 229 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 SRMP19623 302 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 MYF6P23409 242 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 RAB25P57735 213 aa10.43□□□□□ -0.74
CPSF6-204ENST00000547486 QRFPP83859 136 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms