RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 SNX22Q96L94 193 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 GREB1LQ9C091 1923 aaPredicted RBP10.23□□□□□ -0.77
CIT-217ENST00000545913 TSC2P49815 1807 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 FAM157CP0CG43 387 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 CLDN18P56856 261 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 HLA-DRB5Q30154 266 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 C9orf40Q8IXQ3 194 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 TNFRSF19Q9NS68 423 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 NPIPB8E9PQR5 432 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 RPL36A-HNRNPH2H7BZ11 118 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 HRKO00198 91 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 CXCL3P19876 107 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 TMEM50BP56557 158 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 ZNF253O75346 499 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 RPL29P47914 159 aaKnown RBP10.23□□□□□ -0.77
CIT-217ENST00000545913 GGTLC2Q14390 218 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 C1QL3Q5VWW1 255 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 CCL4P13236 92 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 ACAA2P42765 397 aaKnown RBP10.23□□□□□ -0.77
CIT-217ENST00000545913 KIR3DL2P43630 455 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 UCNP55089 124 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 AESQ08117 197 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 SMIM12Q96EX1 92 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 J3QR06 171 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 CORTO00230 105 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 ARG1P05089 322 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 BVESQ8NE79 360 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 OR5AU1Q8NGC0 362 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 UCN2Q96RP3 112 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 OR51B2Q9Y5P1 312 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 CTXND1A0A1B0GTU2 59 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 M0QZK8 103 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 GGCTO75223 188 aaKnown RBP10.23□□□□□ -0.77
CIT-217ENST00000545913 RHBDL1O75783 438 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 BGLAPP02818 100 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 KLF9Q13886 244 aaPredicted RBP10.23□□□□□ -0.77
CIT-217ENST00000545913 C3AR1Q16581 482 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 ZNF519Q8TB69 540 aa10.23□□□□□ -0.77
CIT-217ENST00000545913 TMEM218A2RU14 115 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 C5orf52A6NGY3 159 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 HOXD4P09016 255 aaPredicted RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 KIR2DL1P43626 348 aaPredicted RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 SRSF5Q13243 272 aaKnown RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 ZNF343Q6P1L6 599 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 ADAD2Q8NCV1 583 aaKnown RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 LPAR5Q9H1C0 372 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 A6NDN8 102 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 IL9P15248 144 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 HTN1P15515 57 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 PLPPR5Q32ZL2 321 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 DCAF10Q5QP82 559 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 GBGT1Q8N5D6 347 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 TRAV8-7A0A075B6U6 113 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 APCSP02743 223 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 HOXA6P31267 233 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 EWSR1Q01844 656 aaKnown RBP eCLIP10.22□□□□□ -0.77
CIT-217ENST00000545913 LGALSLQ3ZCW2 172 aaPredicted RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 C16orf82Q7Z2V1 217 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 ATG101Q9BSB4 218 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 SLC25A33Q9BSK2 321 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 GHITMQ9H3K2 345 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 AGFG2O95081 481 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 CSN3P07498 182 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 TMEM255AQ5JRV8 349 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 ERVFRD-1P60508 538 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 TFF2Q03403 129 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 RBM14Q96PK6 669 aaKnown RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 PARP11Q9NR21 331 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 SIPA1L1O43166 1804 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 B4E171 279 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 TSPAN7P41732 249 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 PRSS12P56730 875 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 ZNF721Q8TF20 911 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 ST6GAL2Q96JF0 529 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 ROS1P08922 2347 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 MEOX2P50222 304 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 RBM11P57052 281 aaKnown RBP10.22□□□□□ -0.77
CIT-217ENST00000545913 FAM222BQ8WU58 562 aa10.22□□□□□ -0.77
CIT-217ENST00000545913 MGAMO43451 1857 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 ZNF205O95201 554 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 MDP1Q86V88 176 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 CDX2Q99626 313 aaPredicted RBP10.21□□□□□ -0.77
CIT-217ENST00000545913 CCL27Q9Y4X3 112 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 A0A087X0M5 115 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 A0A1B0GX30 115 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 NKX2-6A6NCS4 301 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 LEUTXA8MZ59 168 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 DLX1P56177 255 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 C8orf82Q6P1X6 216 aaPredicted RBP10.21□□□□□ -0.77
CIT-217ENST00000545913 PSG2P11465 335 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 SERF2P84101 59 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
CIT-217ENST00000545913 C9orf62Q8N4C0 152 aa10.21□□□□□ -0.77
CIT-217ENST00000545913 MGPP08493 103 aa10.21□□□□□ -0.78
CIT-217ENST00000545913 DAOP14920 347 aa10.21□□□□□ -0.78
CIT-217ENST00000545913 HIST1H1BP16401 226 aaKnown RBP10.21□□□□□ -0.78
CIT-217ENST00000545913 PACRGQ96M98 296 aaPredicted RBP10.21□□□□□ -0.78
CIT-217ENST00000545913 LINC00052Q96N35 136 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms