RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PACRGQ96M98 296 aaPredicted RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 MRPL37Q9BZE1 423 aaKnown RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 PATZ1Q9HBE1 687 aaKnown RBP7.49□□□□□ -1.21
CLIP1-218ENST00000545889 SLC7A10Q9NS82 523 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 NAGKQ9UJ70 344 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 KPTNQ9Y664 436 aa7.49□□□□□ -1.21
CLIP1-218ENST00000545889 CSPG4Q6UVK1 2322 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 LY6G6EA0A0G2JKS1 128 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 IFITM5A6NNB3 132 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 MARCH11A6NNE9 402 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 UMAD1C9J7I0 102 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 H3BP45 60 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 CHEK1O14757 476 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 KCNAB3O43448 404 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 MBPP02686 304 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 FAM106CPP0CH98 169 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 COX5AP20674 150 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 RPS4XP62701 263 aaKnown RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 LY6EQ16553 131 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 NSUN5P2Q63ZY6 315 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 OR8I2Q8N0Y5 310 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 OR4S2Q8NH73 311 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 RGP1Q92546 391 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 LHX4Q969G2 390 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 OR2H1Q9GZK4 316 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 IL19Q9UHD0 177 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 U3KQA8 63 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 SZT2Q5T011 3432 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 SPTBN4Q9H254 2564 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 C20orf202A1L168 122 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 SEC14L6B5MCN3 397 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 CDC42EP2O14613 210 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 SYNGR3O43761 229 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 SNCGO76070 127 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 PJVKQ0ZLH3 352 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 SOHLH1Q5JUK2 328 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 RPL7L1Q6DKI1 246 aaKnown RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 PRR27Q6MZM9 219 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF519Q8TB69 540 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ORAI1Q96D31 301 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ATP5SQ99766 215 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 OR2D2Q9H210 308 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 CBLN4Q9NTU7 201 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 TMEM38BQ9NVV0 291 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 OR1A1Q9P1Q5 309 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 TMEM229AB2RXF0 380 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 BCL2L11O43521 198 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 HAND1O96004 215 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 HLA-DQB1P01920 261 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 CRHP06850 196 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 NUTF2P61970 127 aaKnown RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ARF6P62330 175 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 FNDC7Q5VTL7 733 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 PPP1R32Q7Z5V6 425 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 OR1L4Q8NGR5 311 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 FAM168AQ92567 244 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 DPH3Q96FX2 82 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF385AQ96PM9 386 aaKnown RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 TSPAN32Q96QS1 320 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 CHRDL1Q9BU40 450 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 TUBA4BQ9H853 241 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 IGHV3OR15-7A0A075B7D8 119 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 BAP18Q8IXM2 172 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 TVP23CQ96ET8 276 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ADGRG7Q96K78 797 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 CCL13Q99616 98 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ANGPTL4Q9BY76 406 aa7.48□□□□□ -1.21
CLIP1-218ENST00000545889 ACTR3CQ9C0K3 210 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-218ENST00000545889 IGF2RP11717 2491 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 ZNF407Q9C0G0 2248 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 IFNL4K9M1U5 179 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 MPZL1O95297 269 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 SLC25A6P12236 298 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 TDGF1P13385 188 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 HRH1P35367 487 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 TAGLN2P37802 199 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 LPAR6P43657 344 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 PRSS33Q8NF86 280 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 MITD1Q8WV92 249 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 PPP1R1CQ8WVI7 109 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 ITLN1Q8WWA0 313 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 FLYWCH2Q96CP2 140 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 OR2V2Q96R30 315 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 PARP11Q9NR21 331 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 ADAMTS9Q9P2N4 1935 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 TRIOO75962 3097 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 SLC17A2O00624 439 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 RPLP1P05386 114 aaKnown RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 UCP2P55851 309 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 RAG2P55895 527 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 PCOLCEQ15113 449 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 ADIRFQ15847 76 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 WDR38Q5JTN6 314 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 LCN15Q6UWW0 184 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 OR4S1Q8NGB4 309 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 OR52N4Q8NGI2 321 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 BTF3L4Q96K17 158 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-218ENST00000545889 DOK5Q9P104 306 aa7.47□□□□□ -1.21
CLIP1-218ENST00000545889 A6NNC1 897 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms