RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TREML4Q6UXN2 200 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 DRAM1Q8N682 238 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 OR10V1Q8NGI7 309 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 GALMQ96C23 342 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 RAB22AQ9UL26 194 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 HSF4Q9ULV5 492 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 A0A0A6YYD4 124 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 A0A1W2PPI3 338 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 FAM90A9PA6NNJ1 464 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 SOCS1O15524 211 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 FGF9P31371 208 aaPredicted RBP12.58□□□□□ -0.4
CCDC78-216ENST00000544996 VEGFCP49767 419 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 OR10A3P58181 314 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 HTD2P86397 168 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 ZNF816Q0VGE8 651 aaPredicted RBP12.58□□□□□ -0.4
CCDC78-216ENST00000544996 DIAPH2-AS1Q14236 149 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 HABP2Q14520 560 aaPredicted RBP12.58□□□□□ -0.4
CCDC78-216ENST00000544996 MOB3BQ86TA1 216 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 OR56B1Q8NGI3 324 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 SERTAD4Q9NUC0 356 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 JPT1Q9UK76 154 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 SSR3Q9UNL2 185 aa12.58□□□□□ -0.4
CCDC78-216ENST00000544996 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 TXNL1O43396 289 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 RGS11O94810 467 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 NAPSAO96009 420 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 SNRNP70P08621 437 aaKnown RBP12.57□□□□□ -0.4
CCDC78-216ENST00000544996 VDAC2P45880 294 aaPredicted RBP12.57□□□□□ -0.4
CCDC78-216ENST00000544996 REG1BP48304 166 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 MORN2Q502X0 79 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
CCDC78-216ENST00000544996 MOB1BQ7L9L4 216 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 SETD6Q8TBK2 473 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 CFHR4Q92496 578 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
CCDC78-216ENST00000544996 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
CCDC78-216ENST00000544996 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 SHISA3A0PJX4 238 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 LDLRAD4O15165 306 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 TMEM11P17152 192 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 ZNF134P52741 427 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 HMGN3Q15651 99 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 NEDD8Q15843 81 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 C2orf68Q2NKX9 166 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 ABCA11PQ4W5N1 156 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
CCDC78-216ENST00000544996 Q6ZS46 218 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 RTN4IP1Q8WWV3 396 aaPredicted RBP12.56□□□□□ -0.4
CCDC78-216ENST00000544996 IL1F10Q8WWZ1 152 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 ARHGAP5-AS1Q96IT6 56 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 CYYR1Q96J86 154 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 C12orf4Q9NQ89 552 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 AK3Q9UIJ7 227 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
CCDC78-216ENST00000544996 METTL21EPA6NDL7 271 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 FOXI3A8MTJ6 420 aaPredicted RBP12.55□□□□□ -0.4
CCDC78-216ENST00000544996 SLC31A2O15432 143 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 YPEL1O60688 119 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 IGKV1D-33P01593 117 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 IGKV1-33P01594 117 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 PPP1CCP36873 323 aaKnown RBP12.55□□□□□ -0.4
CCDC78-216ENST00000544996 ZNF137PP52743 207 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
CCDC78-216ENST00000544996 HNF4GQ14541 408 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 TPRA1Q86W33 373 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 TGIF2LXQ8IUE1 241 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 LYG1Q8N1E2 194 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 C11orf44Q8N8P7 122 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 ST6GALNAC6Q969X2 333 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 YPEL2Q96QA6 119 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 PECRQ9BY49 303 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 MMP27Q9H306 513 aa12.55□□□□□ -0.4
CCDC78-216ENST00000544996 TRBV6-6A0A0A6YYG2 114 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 NOTOA8MTQ0 251 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 RAB6AP20340 208 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 GADD45AP24522 165 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 TMEM50BP56557 158 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 GNMTQ14749 295 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 FBLN7Q53RD9 439 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 LY6G6FQ5SQ64 297 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 ZNF880Q6PDB4 577 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 OR2AK2Q8NG84 335 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 OR2T10Q8NGZ9 312 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
CCDC78-216ENST00000544996 WNT10AQ9GZT5 417 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 VCX3AQ9NNX9 186 aa12.54□□□□□ -0.4
CCDC78-216ENST00000544996 IGHV3-72A0A0B4J1Y9 119 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 FBXO24O75426 580 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 AMY1AP04745 511 aa12.53□□□□□ -0.4
CCDC78-216ENST00000544996 AMY2AP04746 511 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms