RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR51E1Q8TCB6 317 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 THEM6Q8WUY1 208 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 ZNRF4Q8WWF5 429 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 SLAMF9Q96A28 289 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 C16orf45Q96MC5 204 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-220ENST00000544550 NCOR1P1Q9H4R4 102 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 GPR84Q9NQS5 396 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 PARP11Q9NR21 331 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 GPR173Q9NS66 373 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 MRGBPQ9NV56 204 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 NKIRAS1Q9NYS0 192 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 MTCH1Q9NZJ7 389 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 PSG11Q9UQ72 335 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 BAIAP2Q9UQB8 552 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 FBXO7Q9Y3I1 522 aa3.06□□□□□ -1.92
SNHG1-220ENST00000544550 IGHV7-81A0A0B4J1V7 117 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 A0A0G2JLM5 398 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 FAM230AA0A1W2PPH8 454 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 RIIAD1A6NNX1 92 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 BBIP1A8MTZ0 92 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SIRPB1O00241 398 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 UBE2CO00762 179 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 XRCC3O43542 346 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 PAGE4O60829 102 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GATBO75879 557 aaKnown RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 OR2A4O95047 310 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GADD45GO95257 159 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 OR2H2O95918 312 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SERPINA3P01011 423 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 IGHV3-11P01762 117 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GYPBP06028 91 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SLC2A2P11168 524 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF44P15621 663 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 PRKACAP17612 351 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 EDN2P20800 178 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GLP1RP43220 463 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 REG1BP48304 166 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GSSP48637 474 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GNG10P50151 68 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 NUDT2P50583 147 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 FUT6P51993 359 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 CRIP2P52943 208 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 APOC4P55056 127 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 F2RL1P55085 397 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SYNJ2BPP57105 145 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 TPPP2P59282 170 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 KLF5Q13887 457 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 CRMP1Q14194 572 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 RBMS2Q15434 407 aaKnown RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 ECSCRQ19T08 205 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF829Q3KNS6 432 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 Q3ZCU0 254 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SOHLH1Q5JUK2 328 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF660Q6AZW8 331 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 DEGS2Q6QHC5 323 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SLC25A26Q70HW3 274 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 CROCCP2Q86T23 111 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 TBC1D26Q86UD7 250 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 LINC00311Q8N616 119 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 C8orf31Q8N9H6 132 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM104Q8NE00 496 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 OR52J3Q8NH60 311 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GNPDA2Q8TDQ7 276 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 MRGPRDQ8TDS7 321 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 RTN4IP1Q8WWV3 396 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SNAPC3Q92966 411 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 LEAP2Q969E1 77 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 BORCS8Q96FH0 119 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SPACA5Q96QH8 159 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 AMELYQ99218 206 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 EBF4Q9BQW3 602 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF251Q9BRH9 671 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 OSBPL10Q9BXB5 764 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 MROQ9BYG7 248 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 NMNAT2Q9BZQ4 307 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 PBOV1Q9GZY1 135 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 MOB1AQ9H8S9 216 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 LINC00574Q9H8X3 128 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 MAP6D1Q9H9H5 199 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 SCPEP1Q9HB40 452 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 RHOFQ9HBH0 211 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 IL1RAPQ9NPH3 570 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 GID8Q9NWU2 228 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 FAM206AQ9NX38 181 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 CALYQ9NYX4 217 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 NUFIP1Q9UHK0 495 aaKnown RBP3.05□□□□□ -1.92
SNHG1-220ENST00000544550 CDH10Q9Y6N8 788 aa3.05□□□□□ -1.92
SNHG1-220ENST00000544550 MEIKINA0A087WXM9 373 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 C13orf42A0A1B0GVH6 325 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 GAGE12JA6NER3 117 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 MSGN1A6NI15 193 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 C11orf94C9JXX5 98 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 USP17L23D6RBM5 183 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 NPIPB11E5RHQ5 1161 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 F8VVB4 439 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 F8VWA3 439 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 H3BUA1 57 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 RTL8CO15255 209 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 NBR2O15453 112 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 SOX15O60248 233 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms