RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 C14orf144Q96I85 54 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 DCTN5Q9BTE1 182 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 OBP2BQ9NPH6 170 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 RCC2Q9P258 522 aaKnown RBP13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 TUBD1Q9UJT1 453 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 EWSR1Q01844 656 aaKnown RBP eCLIP13.4□□□□□ -0.263e-24■■□□□ 13
SNRNP70-203ENST00000544278 PLA2G2CQ5R387 149 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM211Q6ICI0 200 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 ZNF561Q8N587 486 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 MRPL30Q8TCC3 161 aaKnown RBP13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 SEBOXQ9HB31 216 aaPredicted RBP13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 GLRX2Q9NS18 164 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 C21orf140B9A014 251 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 E5RGE8 158 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 TUSC2O75896 110 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 LYL1P12980 280 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 IGHV1-2P23083 117 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 RTL6Q6ICC9 239 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 Q6ZRM9 215 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 OR5C1Q8NGR4 320 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 CD300LFQ8TDQ1 290 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 SEC11CQ9BY50 192 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 TREM2Q9NZC2 230 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 DNAJB11Q9UBS4 358 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 TRAPPC2LQ9UL33 140 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 CARHSP1Q9Y2V2 147 aaKnown RBP13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 NSG2Q9Y328 171 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 COL6A6A6NMZ7 2263 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 ABCA1O95477 2261 aa13.4□□□□□ -0.26
SNRNP70-203ENST00000544278 A0A1W2PPE2 198 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 ZNF724A8MTY0 619 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 CHST1O43916 411 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 NXPH2O95156 264 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 GNMTQ14749 295 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 DEFB109BQ30KR1 87 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 SELENOHQ8IZQ5 122 aaKnown RBP13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 PARD6AQ9NPB6 346 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 MMP24Q9Y5R2 645 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 COL12A1Q99715 3063 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 RPS10P46783 165 aaKnown RBP13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 UBE2NP61088 152 aaKnown RBP13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 NAAAQ02083 359 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 SCCPDHQ8NBX0 429 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 OR10D4PQ8NGN7 298 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 GTF3AQ92664 365 aaKnown RBP13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 BCL2L2Q92843 193 aaPredicted RBP13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 FER1L6-AS2Q96M78 137 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 DECR2Q9NUI1 292 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 LRBAP50851 2863 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 KIAA1324LA8MWY0 1029 aaPredicted RBP13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 NAPSAO96009 420 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 HAGHQ16775 308 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 RPRMLQ8N4K4 120 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 GALNT14Q96FL9 552 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 URGCP-MRPS24S4R325 110 aa13.39□□□□□ -0.27
SNRNP70-203ENST00000544278 SPTBN4Q9H254 2564 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 SULT1A2P50226 295 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 DYNLT3P51808 116 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 PCSK4Q6UW60 755 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 OR2C3Q8N628 320 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 LURAP1Q96LR2 239 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 SPACA1Q9HBV2 294 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 CHD3Q12873 2000 aaKnown RBP13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 CA11O75493 328 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 JTBO76095 146 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 OR2H2O95918 312 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 PPP1CBP62140 327 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 VAMP2P63027 116 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 GNG3P63215 75 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 AWAT1Q58HT5 328 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 BTNL3Q6UXE8 466 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 CCDC71LQ8N9Z2 235 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 SMIM8Q96KF7 97 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
SNRNP70-203ENST00000544278 TRDCB7Z8K6 153 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 PGLYRP1O75594 196 aaPredicted RBP13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 ARR3P36575 388 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 AESQ08117 197 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 OR2G3Q8NGZ4 309 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 OR10J5Q8NHC4 309 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 LINC00470Q9BZP3 86 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 FAM234AQ9H0X4 552 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 C7orf77A4D0Y5 90 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 HMGB3O15347 200 aaKnown RBP13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 ATP6V0CP27449 155 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 S100A2P29034 98 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 PSG7Q13046 419 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 BTNL8Q6UX41 500 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 TCEAL7Q9BRU2 100 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 AP4M1O00189 453 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 PSPNO60542 156 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 KIAA0141Q14154 515 aaPredicted RBP13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 OR10V1Q8NGI7 309 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 OR5A2Q8NGI9 324 aa13.37□□□□□ -0.27
SNRNP70-203ENST00000544278 DMRT1Q9Y5R6 373 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms