RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 C12orf77C9JDV5 145 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 MCRIP1C9JLW8 97 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 G3V318 75 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 LANCL1O43813 399 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 IGLV1-40P01703 118 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 FRMD6-AS1P0C7T7 363 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 BDKRB2P30411 391 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 RAB9AP51151 201 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 ZNF134P52741 427 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 GNB1P62873 340 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 LSAMPQ13449 338 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 KIAA0141Q14154 515 aaPredicted RBP11.98□□□□□ -0.49
RTN3-211ENST00000542238 GPR176Q14439 515 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 SLC22A6Q4U2R8 563 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 CT45A1Q5HYN5 189 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 SYT6Q5T7P8 510 aaPredicted RBP11.98□□□□□ -0.49
RTN3-211ENST00000542238 ASPHD1Q5U4P2 390 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 TRAT1Q6PIZ9 186 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 OR10V1Q8NGI7 309 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 CT45A3Q8NHU0 189 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 ZNF251Q9BRH9 671 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 C9orf16Q9BUW7 83 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 OR51J1Q9H342 316 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 GHITMQ9H3K2 345 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 AMBNQ9NP70 447 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 PARP11Q9NR21 331 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 ERGIC3Q9Y282 383 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 GMPPBQ9Y5P6 360 aa11.98□□□□□ -0.49
RTN3-211ENST00000542238 EI24O14681 340 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 ATP6V0E1O15342 81 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 HBZP02008 142 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 SPNP16150 400 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 RPL22L1Q6P5R6 122 aaKnown RBP11.97□□□□□ -0.49
RTN3-211ENST00000542238 PACRGLQ8N7B6 248 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 OR6Q1Q8NGQ2 317 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 OR4K15Q8NH41 348 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 RGP1Q92546 391 aaPredicted RBP11.97□□□□□ -0.49
RTN3-211ENST00000542238 RBMXL1Q96E39 390 aaKnown RBP11.97□□□□□ -0.49
RTN3-211ENST00000542238 RDH12Q96NR8 316 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 ETAA1Q9NY74 926 aa11.97□□□□□ -0.49
RTN3-211ENST00000542238 LCE6AA0A183 80 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 HLA-DRB1P01911 266 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 GP9P14770 177 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 GABRB1P18505 474 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 ALDH3A2P51648 485 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 ACTBP60709 375 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 CCDC58Q4VC31 144 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 IZUMO2Q6UXV1 221 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 OR1L1Q8NH94 360 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 OR2S2Q9NQN1 319 aa11.96□□□□□ -0.49
RTN3-211ENST00000542238 MRPS28Q9Y2Q9 187 aaKnown RBP11.96□□□□□ -0.49
RTN3-211ENST00000542238 RPL36Q9Y3U8 105 aaKnown RBP11.96□□□□□ -0.49
RTN3-211ENST00000542238 IGHV7-81A0A0B4J1V7 117 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 A0A1W2PP11 408 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 LINC01619G3V211 115 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 NBR2O15453 112 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 RAB12Q6IQ22 244 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 LIN54Q6MZP7 749 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 OR52I1Q8NGK6 324 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 DLX4Q92988 240 aaPredicted RBP11.95□□□□□ -0.5
RTN3-211ENST00000542238 MRPS24Q96EL2 167 aaKnown RBP11.95□□□□□ -0.5
RTN3-211ENST00000542238 CITED4Q96RK1 184 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 ANKRD60Q9BZ19 345 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 KCNIP1Q9NZI2 227 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 RCC2Q9P258 522 aaKnown RBP11.95□□□□□ -0.5
RTN3-211ENST00000542238 KIAA1456Q9P272 454 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 CKLFQ9UBR5 152 aa11.95□□□□□ -0.5
RTN3-211ENST00000542238 CA11O75493 328 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 OR8U9P0C7N5 309 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 BLVRBP30043 206 aaPredicted RBP11.94□□□□□ -0.5
RTN3-211ENST00000542238 SLURP1P55000 103 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 C5orf64Q2M2E5 130 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 MORN2Q502X0 79 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 OGFRL1Q5TC84 451 aaPredicted RBP11.94□□□□□ -0.5
RTN3-211ENST00000542238 TMPRSS11AQ6ZMR5 421 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 MINDY2Q8NBR6 621 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 ABHD14AQ9BUJ0 271 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 CST11Q9H112 138 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
RTN3-211ENST00000542238 TAF9BQ9HBM6 251 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 PEX16Q9Y5Y5 336 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 DNAH7Q8WXX0 4024 aa11.94□□□□□ -0.5
RTN3-211ENST00000542238 LIMS3P0CW19 117 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 LIMS4P0CW20 117 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
RTN3-211ENST00000542238 CNTFRP26992 372 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 ECSCRQ19T08 205 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 ZFAND6Q6FIF0 208 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 GAPTQ8N292 157 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 CBR4Q8N4T8 237 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 ARPC1AQ92747 370 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 RITA1Q96K30 269 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
RTN3-211ENST00000542238 MRPL20Q9BYC9 149 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms