RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RIMS4Q9H426 269 aaPredicted RBP10.5□□□□□ -0.73
LTBR-208ENST00000541005 PLEKHJ1Q9NW61 149 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 KCNIP1Q9NZI2 227 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 JPT1Q9UK76 154 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 RAB22AQ9UL26 194 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 SSR3Q9UNL2 185 aa10.5□□□□□ -0.73
LTBR-208ENST00000541005 IGHV3-43A0A0B4J1X8 118 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 HSD17B6O14756 317 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 TIMM23O14925 209 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 OR2F2O95006 317 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 TNFAIP8O95379 198 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 IGHV3-43DP0DP04 118 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 TMEM50BP56557 158 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 DIAPH2-AS1Q14236 149 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 NEDD8Q15843 81 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 FBLN7Q53RD9 439 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 FAM53AQ6NSI3 398 aaPredicted RBP10.49□□□□□ -0.73
LTBR-208ENST00000541005 PTX4Q96A99 478 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 AKR1E2Q96JD6 320 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 RBM14Q96PK6 669 aaKnown RBP10.49□□□□□ -0.73
LTBR-208ENST00000541005 GNG12Q9UBI6 72 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 AK3Q9UIJ7 227 aa10.49□□□□□ -0.73
LTBR-208ENST00000541005 A0A1W2PPE3 182 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 TRIM64CA6NLI5 447 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 NOTOA8MTQ0 251 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 SLC31A2O15432 143 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 FAM106CPP0CH98 169 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 IL3RAP26951 378 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 VEGFCP49767 419 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
LTBR-208ENST00000541005 PLA2G7Q13093 441 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 MORN2Q502X0 79 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 CT45A1Q5HYN5 189 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 PLAC9Q5JTB6 97 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 IZUMO1Q8IYV9 350 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 DRAM1Q8N682 238 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 OR56B4Q8NH76 319 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 CT45A3Q8NHU0 189 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 GALMQ96C23 342 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 ARHGAP5-AS1Q96IT6 56 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 KCTD7Q96MP8 289 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 SLC25A33Q9BSK2 321 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 PECRQ9BY49 303 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 PRSS22Q9GZN4 317 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 OR51E2Q9H255 320 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 C12orf4Q9NQ89 552 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 OR2S2Q9NQN1 319 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 SERTAD4Q9NUC0 356 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 MGAT4AQ9UM21 535 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 SIGLEC9Q9Y336 463 aa10.48□□□□□ -0.73
LTBR-208ENST00000541005 TRRAPQ9Y4A5 3859 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 A0A087WXM4 84 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 M0QZK8 103 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 RAB27BO00194 218 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 TXNL1O43396 289 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 YPEL1O60688 119 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 RGS11O94810 467 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 GAPDHP04406 335 aaKnown RBP10.47□□□□□ -0.73
LTBR-208ENST00000541005 CD36P16671 472 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 GADD45AP24522 165 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 CD24P25063 80 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 ZNF134P52741 427 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 GNMTQ14749 295 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 Q6ZTK2 550 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 PRR18Q8N4B5 295 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 TSPAN14Q8NG11 270 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 OR10V1Q8NGI7 309 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 WIPF2Q8TF74 440 aaPredicted RBP10.47□□□□□ -0.73
LTBR-208ENST00000541005 RTN4IP1Q8WWV3 396 aaPredicted RBP10.47□□□□□ -0.73
LTBR-208ENST00000541005 YPEL2Q96QA6 119 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 ABRACLQ9P1F3 81 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 VWFP04275 2813 aa10.47□□□□□ -0.73
LTBR-208ENST00000541005 PLXNB1O43157 2135 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 A0A0B4J203 849 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 MFNGO00587 321 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 LANCL1O43813 399 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 RRP9O43818 475 aaKnown RBP10.46□□□□□ -0.73
LTBR-208ENST00000541005 AMY1AP04745 511 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 AMY2AP04746 511 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 SNRNP70P08621 437 aaKnown RBP10.46□□□□□ -0.73
LTBR-208ENST00000541005 SCAND1P57086 179 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 BLCAPP62952 87 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 HLA-DRB3P79483 266 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 EBI3Q14213 229 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 HERPUD1Q15011 391 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 SFXN4Q6P4A7 337 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 KLHDC1Q8N7A1 406 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 RAB3CQ96E17 227 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 CHCHD6Q9BRQ6 235 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 HDHD3Q9BSH5 251 aaPredicted RBP10.46□□□□□ -0.73
LTBR-208ENST00000541005 ABHD14AQ9BUJ0 271 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 WNT10AQ9GZT5 417 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 CHMP1AQ9HD42 196 aaPredicted RBP10.46□□□□□ -0.73
LTBR-208ENST00000541005 Q9N2K0 584 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 VCX3AQ9NNX9 186 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 KCNK7Q9Y2U2 307 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 MOB4Q9Y3A3 225 aa10.46□□□□□ -0.73
LTBR-208ENST00000541005 METTL21EPA6NDL7 271 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms