RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 LIAT1Q6ZQX7 453 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 ERGIC1Q969X5 290 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 SDSLQ96GA7 329 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 DIRC2Q96SL1 478 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 RNF126Q9BV68 326 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 METTL8Q9H825 291 aaKnown RBP10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 ABCA4P78363 2273 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF462Q96JM2 2506 aa10.2□□□□□ -0.78
AP003559.1-201ENST00000540906 FAM208BQ5VWN6 2430 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 C3orf85A0A1B0GTC6 90 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 LYNX1G3V0Z9 82 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM178BH3BS89 294 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 MGST3O14880 152 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 HSPA12AO43301 675 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 PGLYRP1O75594 196 aaPredicted RBP10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 CFDP00746 253 aaPredicted RBP10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 OR8U9P0C7N5 309 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 LYNX1P0DP58 116 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 P2RX3P56373 397 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 FAM209AQ5JX71 171 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 MEX3BQ6ZN04 569 aaKnown RBP10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 GALNT11Q8NCW6 608 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 OR8U1Q8NH10 309 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 CCL17Q92583 94 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 ARL11Q969Q4 196 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 KCNIP1Q9NZI2 227 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 MBD2Q9UBB5 411 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 RNF150Q9ULK6 438 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 SPTBN1Q01082 2364 aaKnown RBP10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 HMSDA8MTL9 139 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 B9A039 149 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 CLDN14O95500 239 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 TNFRSF1AP19438 455 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 EDDM3BP56851 147 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 C11orf87Q6NUJ2 197 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 LYPD2Q6UXB3 125 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 LRTM2Q8N967 370 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 CCDC71LQ8N9Z2 235 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 ASB13Q8WXK3 278 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 NMES1Q9C002 83 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 SLA2Q9H6Q3 261 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM106BQ9NUM4 274 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 OR5AC2Q9NZP5 309 aa10.19□□□□□ -0.78
AP003559.1-201ENST00000540906 ARID1AO14497 2285 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 CGB3P0DN86 165 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 CGB7P0DN87 165 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 IRF2P14316 349 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 OMGP23515 440 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 IL2RGP31785 369 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 LUMP51884 338 aaPredicted RBP10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 RAB32Q13637 225 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 OPCMLQ14982 345 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 C17orf58Q2M2W7 97 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 TMUB2Q71RG4 321 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 MUC15Q8N387 334 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 SLC35G3Q8N808 338 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 BVESQ8NE79 360 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 GALMQ96C23 342 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 LURAP1Q96LR2 239 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 SUCNR1Q9BXA5 334 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 GON7Q9BXV9 100 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 EGLN1Q9GZT9 426 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM222Q9H0R3 208 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 DNTTIP1Q9H147 329 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 TNFSF18Q9UNG2 199 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 KCNIP3Q9Y2W7 256 aa10.18□□□□□ -0.78
AP003559.1-201ENST00000540906 RNF222A6NCQ9 220 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 VSTM5A8MXK1 200 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 L7N2F9 121 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 LGALS8O00214 317 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 SIGLEC5O15389 551 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 IGHV3-7P01780 117 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 RNF224P0DH78 156 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 SLC25A4P12235 298 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 AP2S1P53680 142 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 LINC00205P59089 165 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 IAH1Q2TAA2 248 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 CR1LQ2VPA4 569 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 C6orf183Q5T699 404 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 TMEM268Q5VZI3 342 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 SELENOHQ8IZQ5 122 aaKnown RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 FAM185AQ8N0U4 392 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF561Q8N587 486 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 DRAM1Q8N682 238 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 OR51H1Q8NH63 302 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 RRNAD1Q96FB5 475 aaKnown RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 LRRC46Q96FV0 321 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 KCNS2Q9ULS6 477 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 LY6HO94772 140 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 IGKV1-39P01597 117 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 IGKV1D-39P04432 117 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 MUC1P15941 1255 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 COL8A2P25067 703 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 PSMB6P28072 239 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 ERVFRD-1P60508 538 aa10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 EIF4EBP1Q13541 118 aaPredicted RBP10.17□□□□□ -0.78
AP003559.1-201ENST00000540906 ZNF546Q86UE3 836 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms