RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ARHGAP5-AS1Q96IT6 56 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 CHCHD6Q9BRQ6 235 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 PECRQ9BY49 303 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 LIN7BQ9HAP6 207 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 RAB9BQ9NP90 201 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 KCNIP1Q9NZI2 227 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 RAB22AQ9UL26 194 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 TRBV6-6A0A0A6YYG2 114 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 TIMM23O14925 209 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 TNFAIP8O95379 198 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 CD36P16671 472 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 MNDAP41218 407 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 RANBP1P43487 201 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 RAB7AP51149 207 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 ARHGDIBP52566 201 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 BLCAPP62952 87 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
CD9-209ENST00000540891 HABP2Q14520 560 aaPredicted RBP13.51□□□□□ -0.25
CD9-209ENST00000540891 CT45A1Q5HYN5 189 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 SLC25A48Q6ZT89 311 aaKnown RBP13.51□□□□□ -0.25
CD9-209ENST00000540891 Q6ZTK2 550 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 DRAM1Q8N682 238 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 OR56B1Q8NGI3 324 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 OR56B4Q8NH76 319 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 CT45A3Q8NHU0 189 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 GNG12Q9UBI6 72 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 JPT1Q9UK76 154 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 KCNK7Q9Y2U2 307 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
CD9-209ENST00000540891 A0A087WXM4 84 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 RAB27BO00194 218 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 HSD17B6O14756 317 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 CLEC2LP0C7M8 214 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 RAB6AP20340 208 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 REG1BP48304 166 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 ZNF137PP52743 207 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 HTD2P86397 168 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 MORN2Q502X0 79 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 TPRA1Q86W33 373 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 OR8H3Q8N146 312 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 OR2T6Q8NHC8 308 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 RBM14Q96PK6 669 aaKnown RBP13.5□□□□□ -0.25
CD9-209ENST00000540891 CENPOQ9BU64 300 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 ZNF696Q9H7X3 374 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 OR2S2Q9NQN1 319 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 SERTAD4Q9NUC0 356 aa13.5□□□□□ -0.25
CD9-209ENST00000540891 IGHV1-3A0A0C4DH29 117 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 TRIM64CA6NLI5 447 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 RRP9O43818 475 aaKnown RBP13.49□□□□□ -0.25
CD9-209ENST00000540891 OR2F2O95006 317 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 SNRNP70P08621 437 aaKnown RBP13.49□□□□□ -0.25
CD9-209ENST00000540891 SDC2P34741 201 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 PPP1CCP36873 323 aaKnown RBP13.49□□□□□ -0.25
CD9-209ENST00000540891 C16orf82Q7Z2V1 217 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 CAPSLQ8WWF8 208 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 KCTD7Q96MP8 289 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
CD9-209ENST00000540891 RIMS4Q9H426 269 aaPredicted RBP13.49□□□□□ -0.25
CD9-209ENST00000540891 CHMP1AQ9HD42 196 aaPredicted RBP13.49□□□□□ -0.25
CD9-209ENST00000540891 YPEL1O60688 119 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 GAPDHP04406 335 aaKnown RBP13.48□□□□□ -0.25
CD9-209ENST00000540891 AMY1AP04745 511 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 AMY2AP04746 511 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 PRR31Q5SQ13 230 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 STEAP3Q658P3 488 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 SFXN4Q6P4A7 337 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 MOB1BQ7L9L4 216 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 ODF3L1Q8IXM7 274 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 OR10R2Q8NGX6 335 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 RTN4IP1Q8WWV3 396 aaPredicted RBP13.48□□□□□ -0.25
CD9-209ENST00000540891 PTX4Q96A99 478 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 GALMQ96C23 342 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 YIPF6Q96EC8 236 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 YPEL2Q96QA6 119 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 PRSS22Q9GZN4 317 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 Q9N2K0 584 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 C12orf4Q9NQ89 552 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 DAPK2Q9UIK4 370 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 TRRAPQ9Y4A5 3859 aa13.48□□□□□ -0.25
CD9-209ENST00000540891 MFNGO00587 321 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 FAM106CPP0CH98 169 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 IL3RAP26951 378 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 TGFBR1P36897 503 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 MXD1Q05195 221 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 TMEM95Q3KNT9 176 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 LY6G6FQ5SQ64 297 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 C11orf88Q6PI97 169 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 KLHDC1Q8N7A1 406 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 RAB3CQ96E17 227 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 CMSS1Q9BQ75 279 aaKnown RBP13.47□□□□□ -0.25
CD9-209ENST00000540891 ABHD14AQ9BUJ0 271 aa13.47□□□□□ -0.25
CD9-209ENST00000540891 IGHV3-72A0A0B4J1Y9 119 aa13.46□□□□□ -0.25
CD9-209ENST00000540891 SH2D7A6NKC9 451 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms