RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 IGHV7-81A0A0B4J1V7 117 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 A0A0G2JND7 137 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 A6NIN4 97 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF736B4DX44 427 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SLC33A1O00400 549 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 NME4O00746 187 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 TXNL1O43396 289 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SOX15O60248 233 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 PROP1O75360 226 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SRSF10O75494 262 aaKnown RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RBMXL2O75526 392 aaKnown RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 KRT36O76013 467 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SERPINA3P01011 423 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 HLA-DRB1P01911 266 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 MBPP02686 304 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SLC2A2P11168 524 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF44P15621 663 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 FASP25445 335 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 IL3RAP26951 378 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 GLP1RP43220 463 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RBP2P50120 134 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RIDAP52758 137 aaKnown RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 CRIP2P52943 208 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 ATP1B3P54709 279 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SNU13P55769 128 aaKnown RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 APOFQ13790 326 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 KLF5Q13887 457 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 UBE2V2Q15819 145 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SLC35D3Q5M8T2 416 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 BCL2L15Q5TBC7 163 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SUMO4Q6EEV6 95 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 PYHIN1Q6K0P9 492 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 Q6P435 159 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 FAHD1Q6P587 224 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF66Q6ZN08 573 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RDH10Q8IZV5 341 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 DEFB125Q8N687 156 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 DNAAF1Q8NEP3 725 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 OR9Q2Q8NGE9 314 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 OR51T1Q8NGJ9 327 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 OR9G4Q8NGQ1 327 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RFESDQ8TAC1 157 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 ASB17Q8WXJ9 295 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 MCUR1Q96AQ8 359 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 C10orf35Q96D05 121 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RCN3Q96D15 328 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 PYURFQ96I23 114 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SPACA5Q96QH8 159 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 KCTD14Q9BQ13 255 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 NEURL2Q9BR09 285 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 BTBD10Q9BSF8 475 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 YIPF3Q9GZM5 350 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 CHST5Q9GZS9 411 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 CST11Q9H112 138 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 PPIL3Q9H2H8 161 aaKnown RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SRD5A3Q9H8P0 318 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 GORASP2Q9H8Y8 452 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 PLEKHA3Q9HB20 300 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RHOFQ9HBH0 211 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 RANGRFQ9HD47 186 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 PARP11Q9NR21 331 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 ARMC1Q9NVT9 282 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 SLC2A8Q9NY64 477 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 FOXA2Q9Y261 457 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 GSTK1Q9Y2Q3 226 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 TMEM14AQ9Y6G1 99 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-214ENST00000540865 FAT1Q14517 4588 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
SNHG1-214ENST00000540865 MEIKINA0A087WXM9 373 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 A0A0J9YWU9 116 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 A0A1W2PN81 502 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 A0A1W2PPE3 182 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 IZUMO1RA6ND01 250 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 LOC110117498-PIK3R3F6TDL0 507 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TNFRSF11BO00300 401 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 DEGS1O15121 323 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 GMNNO75496 209 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CCNB2O95067 398 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 SOX14O95416 240 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 IGHV3-11P01762 117 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CSTBP04080 98 aaKnown RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 FABP3P05413 133 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CSN3P07498 182 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CALCBP10092 127 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 GZMHP20718 246 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 PRKACBP22694 351 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CD40LGP29965 261 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 BLVRBP30043 206 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CHRNA7P36544 502 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 VHLP40337 213 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF137PP52743 207 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 HCCSP53701 268 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 MTCP1P56278 107 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TCTAP57738 103 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CD81P60033 236 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 ACTR3P61158 418 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 EWSR1Q01844 656 aaKnown RBP eCLIP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms