RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 MOSP00540 346 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 CELP19835 753 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 CD1BP29016 333 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 BDKRB2P30411 391 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 F2RL1P55085 397 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 PPP3R1P63098 170 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 SPHARQ15513 63 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 MPV17LQ2QL34 196 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 SLC22A6Q4U2R8 563 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 NKAPLQ5M9Q1 402 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 LINC00596Q86U02 117 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 ZFP41Q8N8Y5 198 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 ZNF439Q8NDP4 499 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 OR10V1Q8NGI7 309 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 OR8U1Q8NH10 309 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 NEK7Q8TDX7 302 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
TRIM65-203ENST00000540812 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
TRIM65-203ENST00000540812 LSM2Q9Y333 95 aaKnown RBP12.71□□□□□ -0.37
TRIM65-203ENST00000540812 LSM4Q9Y4Z0 139 aaKnown RBP12.71□□□□□ -0.37
TRIM65-203ENST00000540812 RYR2Q92736 4967 aa12.71□□□□□ -0.38
TRIM65-203ENST00000540812 C12orf77C9JDV5 145 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 AIPO00170 330 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 ORC5O43913 435 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 RAMP3O60896 148 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 ELANEP08246 267 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 IGFBP3P17936 291 aaPredicted RBP12.7□□□□□ -0.38
TRIM65-203ENST00000540812 IL3RAP26951 378 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 CDX1P47902 265 aaPredicted RBP12.7□□□□□ -0.38
TRIM65-203ENST00000540812 ZNF134P52741 427 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 GP2P55259 537 aaKnown RBP12.7□□□□□ -0.38
TRIM65-203ENST00000540812 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM65-203ENST00000540812 DOC2BQ14184 412 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 Q499Y3 187 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 OR5M8Q8NGP6 311 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 CYYR1Q96J86 154 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 S100A13Q99584 98 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 GON7Q9BXV9 100 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 SCOCQ9UIL1 159 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 U3KQK5 164 aa12.7□□□□□ -0.38
TRIM65-203ENST00000540812 SEC14L6B5MCN3 397 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 GPX5O75715 221 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 IGHG4P01861 327 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 ECI1P42126 302 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 ZNF137PP52743 207 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 MED22Q15528 200 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 Q3ZCU0 254 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 SLC25A48Q6ZT89 311 aaKnown RBP12.69□□□□□ -0.38
TRIM65-203ENST00000540812 OR1L1Q8NH94 360 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 THRSPQ92748 146 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 CCDC90BQ9GZT6 254 aa12.69□□□□□ -0.38
TRIM65-203ENST00000540812 RCC2Q9P258 522 aaKnown RBP12.69□□□□□ -0.38
TRIM65-203ENST00000540812 TRAV8-7A0A075B6U6 113 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 MRPS14O60783 128 aaKnown RBP12.68□□□□□ -0.38
TRIM65-203ENST00000540812 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
TRIM65-203ENST00000540812 GTF2F2P13984 249 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 VDAC1P21796 283 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 FHL3Q13643 280 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 SYT6Q5T7P8 510 aaPredicted RBP12.68□□□□□ -0.38
TRIM65-203ENST00000540812 MS4A15Q8N5U1 240 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 OR4K15Q8NH41 348 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 KCTD7Q96MP8 289 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 ASCL2Q99929 193 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 YTHDF1Q9BYJ9 559 aaKnown RBP12.68□□□□□ -0.38
TRIM65-203ENST00000540812 ISYNA1Q9NPH2 558 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 ETAA1Q9NY74 926 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 GNG12Q9UBI6 72 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 CKLFQ9UBR5 152 aa12.68□□□□□ -0.38
TRIM65-203ENST00000540812 TRBV5-7A0A0A0MS05 114 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
TRIM65-203ENST00000540812 HBZP02008 142 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 PSMB8P28062 276 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 SOX6P35712 828 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 GABARAPL2P60520 117 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 C5orf24Q7Z6I8 188 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 PRR18Q8N4B5 295 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 OR8H1Q8NGG4 311 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 C4orf3Q8WVX3 66 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 MUL1Q969V5 352 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 TRAPPC2LQ9UL33 140 aa12.67□□□□□ -0.38
TRIM65-203ENST00000540812 DNAH1Q9P2D7 4330 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 MCRIP1C9JLW8 97 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 SPINT2O43291 252 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 TXNL1O43396 289 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 IGF1P05019 195 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 SLC2A2P11168 524 aaPredicted RBP12.66□□□□□ -0.38
TRIM65-203ENST00000540812 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
TRIM65-203ENST00000540812 FSTP19883 344 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
TRIM65-203ENST00000540812 LSAMPQ13449 338 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 TPBGQ13641 420 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 TBCEQ15813 527 aaPredicted RBP12.66□□□□□ -0.38
TRIM65-203ENST00000540812 C6orf183Q5T699 404 aa12.66□□□□□ -0.38
TRIM65-203ENST00000540812 ASPHD1Q5U4P2 390 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms