RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LEAP2Q969E1 77 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 ST6GALNAC6Q969X2 333 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 EAF1Q96JC9 268 aaPredicted RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 OPALINQ96PE5 141 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 CITED4Q96RK1 184 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 NEURL2Q9BR09 285 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 CENPOQ9BU64 300 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 ISYNA1Q9NPH2 558 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 IDI2-AS1Q9NZ38 188 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 STUB1Q9UNE7 303 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 DIMT1Q9UNQ2 313 aaKnown RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 EXOSC1Q9Y3B2 195 aaKnown RBP5.69□□□□□ -1.5
YBX3-209ENST00000540747 SMAD5-AS1Q9Y6J3 95 aa5.69□□□□□ -1.5
YBX3-209ENST00000540747 IGHV1-3A0A0C4DH29 117 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 I3L521 148 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 HSD17B6O14756 317 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RGS5O15539 181 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 CDRT1O95170 752 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 PTTG1O95997 202 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 IGHV3-7P01780 117 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 IGF1P05019 195 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 ISG15P05161 165 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 LYL1P12980 280 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 ZNF44P15621 663 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 HTR1FP30939 366 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 TNFSF8P32971 234 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 GLP1RP43220 463 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 INSL3P51460 131 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RAB25P57735 213 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 NANOS3P60323 173 aaKnown RBP5.68□□□□□ -1.5
YBX3-209ENST00000540747 ZNF85Q03923 595 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RAB40BQ12829 278 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 HES1Q14469 280 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 SSX1Q16384 188 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 ZNF260Q3ZCT1 412 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 CXorf66Q5JRM2 361 aaPredicted RBP5.68□□□□□ -1.5
YBX3-209ENST00000540747 ELP2Q6IA86 826 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 TMPRSS11AQ6ZMR5 421 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 SNX29P2Q8IUI4 249 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 GID4Q8IVV7 300 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 LINC00311Q8N616 119 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 OR52I1Q8NGK6 324 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 OR2G2Q8NGZ5 317 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 OR10AC1Q8NH08 325 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 PLPPR1Q8TBJ4 325 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 HAVCR2Q8TDQ0 301 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RFKQ969G6 155 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RFT1Q96AA3 541 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 FGGYQ96C11 551 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RNFT2Q96EX2 444 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 SPACA5Q96QH8 159 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 TBX5Q99593 518 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 HSPB9Q9BQS6 159 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 CCDC32Q9BV29 185 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 RNF167Q9H6Y7 350 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 EDA2RQ9HAV5 297 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 FGF20Q9NP95 211 aaPredicted RBP5.68□□□□□ -1.5
YBX3-209ENST00000540747 CLEC2DQ9UHP7 191 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 KIF25Q9UIL4 384 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 SIRT4Q9Y6E7 314 aaPredicted RBP5.68□□□□□ -1.5
YBX3-209ENST00000540747 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
YBX3-209ENST00000540747 C15orf65H3BRN8 121 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 J3QRE1 110 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 CTDSP2O14595 271 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 DEGS1O15121 323 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 APOL3O95236 402 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 HCKP08631 526 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 FRMD6-AS1P0C7T7 363 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 PPIFP30405 207 aaKnown RBP5.67□□□□□ -1.5
YBX3-209ENST00000540747 SSTR5P35346 364 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 ATP6V1E1P36543 226 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 RPS19P39019 145 aaKnown RBP5.67□□□□□ -1.5
YBX3-209ENST00000540747 ETV6P41212 452 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 ZNF137PP52743 207 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 WNT4P56705 351 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 TMEM244Q5VVB8 128 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 STEAP3Q658P3 488 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 CCDC190Q86UF4 302 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 CADM3Q8N126 398 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 ZNF565Q8N9K5 539 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 OR51A4Q8NGJ6 313 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 OR5D18Q8NGL1 313 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 OR13C9Q8NGT0 318 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 UFD1Q92890 307 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 KCTD7Q96MP8 289 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 S1PR3Q99500 378 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 TM2D3Q9BRN9 247 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 GON7Q9BXV9 100 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 GNB4Q9HAV0 340 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 MRPS18AQ9NVS2 196 aaKnown RBP5.67□□□□□ -1.5
YBX3-209ENST00000540747 FRRS1LQ9P0K9 344 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 ZNF581Q9P0T4 197 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 LSM2Q9Y333 95 aaKnown RBP5.67□□□□□ -1.5
YBX3-209ENST00000540747 DNAH10Q8IVF4 4471 aa5.67□□□□□ -1.5
YBX3-209ENST00000540747 MEIKINA0A087WXM9 373 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 IGHV3-72A0A0B4J1Y9 119 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 A0A1W2PPE3 182 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 FAM90A10PA6NDY2 464 aa5.66□□□□□ -1.5
YBX3-209ENST00000540747 OR4C45A6NMZ5 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms