RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 LOC100506127A0A0U1RQW1 187 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 NOTOA8MTQ0 251 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 TIMM23O14925 209 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 BRS3P32247 399 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 SDC2P34741 201 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 HABP2Q14520 560 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 HMGN3Q15651 99 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 CT45A1Q5HYN5 189 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 Q6ZTK2 550 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 ZNF554Q86TJ5 538 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 TPRA1Q86W33 373 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 OR56B1Q8NGI3 324 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 OR4C13Q8NGP0 309 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 CT45A3Q8NHU0 189 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 CFHR4Q92496 578 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 OCSTAMPQ9BR26 566 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 NPFFR1Q9GZQ6 430 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 RANBP3Q9H6Z4 567 aaPredicted RBP14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 KCNIP1Q9NZI2 227 aa14.65□□□□□ -0.06
SNRPA1-203ENST00000540017 TRIM64CA6NLI5 447 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 FAM90A9PA6NNJ1 464 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 REG1BP48304 166 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 BLCAPP62952 87 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 MXD1Q05195 221 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 Q3ZCU0 254 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 MORN2Q502X0 79 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 CCDC144NLQ6NUI1 221 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 SLC25A48Q6ZT89 311 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 DRAM1Q8N682 238 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 OR56B4Q8NH76 319 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 ST6GALNAC6Q969X2 333 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 KCTD7Q96MP8 289 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 CITED1Q99966 193 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 CHMP1AQ9HD42 196 aaPredicted RBP14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 RAB9BQ9NP90 201 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 OR2S2Q9NQN1 319 aa14.64□□□□□ -0.07
SNRPA1-203ENST00000540017 TRBV6-6A0A0A6YYG2 114 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 RAB27BO00194 218 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 HSD17B6O14756 317 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 RAB6AP20340 208 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 PPP1CCP36873 323 aaKnown RBP14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 TGFBR1P36897 503 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 MNDAP41218 407 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 RANBP1P43487 201 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 ARHGDIBP52566 201 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 TMEM30BQ3MIR4 351 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 Q8N2B8 174 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 SETD6Q8TBK2 473 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 CAPSLQ8WWF8 208 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 YIPF6Q96EC8 236 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 DAPK2Q9UIK4 370 aa14.63□□□□□ -0.07
SNRPA1-203ENST00000540017 SNRNP70P08621 437 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 SNRPBP14678 240 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 RAB7AP51149 207 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 HTD2P86397 168 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 ZNF816Q0VGE8 651 aaPredicted RBP14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 SFXN4Q6P4A7 337 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 OR8H3Q8N146 312 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 OR10R2Q8NGX6 335 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 GALMQ96C23 342 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 RAB3CQ96E17 227 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 RBMXL1Q96E39 390 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 RBM14Q96PK6 669 aaKnown RBP14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 SLC25A33Q9BSK2 321 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 SERTAD4Q9NUC0 356 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 JPT1Q9UK76 154 aa14.62□□□□□ -0.07
SNRPA1-203ENST00000540017 FBN3Q75N90 2809 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 IGHV1-3A0A0C4DH29 117 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 GAPDHP04406 335 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 AMY1AP04745 511 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 AMY2AP04746 511 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 HIST2H2BDQ6DRA6 164 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 THNSL2Q86YJ6 484 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 OR2T6Q8NHC8 308 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 RTN4IP1Q8WWV3 396 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 IL1F10Q8WWZ1 152 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 PTX4Q96A99 478 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 CMSS1Q9BQ75 279 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 RIMS4Q9H426 269 aaPredicted RBP14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 Q9N2K0 584 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 C12orf4Q9NQ89 552 aa14.61□□□□□ -0.07
SNRPA1-203ENST00000540017 IGHV3-72A0A0B4J1Y9 119 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 SH2D7A6NKC9 451 aaPredicted RBP14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 MFNGO00587 321 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 YPEL1O60688 119 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 OR2F2O95006 317 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 GNB3P16520 340 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 ZNF137PP52743 207 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 STEAP3Q658P3 488 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 MOB1BQ7L9L4 216 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 MOB3BQ86TA1 216 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 SGMS2Q8NHU3 365 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 YPEL2Q96QA6 119 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 PRSS22Q9GZN4 317 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 PARP12Q9H0J9 701 aaKnown RBP14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 ATG5Q9H1Y0 275 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 ABRACLQ9P1F3 81 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 ELF5Q9UKW6 265 aaPredicted RBP14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 TRRAPQ9Y4A5 3859 aa14.6□□□□□ -0.07
SNRPA1-203ENST00000540017 A0A075B6Q4 140 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms