RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 IZUMO1Q8IYV9 350 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 DYRK2Q92630 601 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 TMEM186Q96B77 213 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 CHMP1AQ9HD42 196 aaPredicted RBP12.74□□□□□ -0.37
DDB1-216ENST00000539739 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 C19orf12Q9NSK7 152 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 COPZ2Q9P299 210 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 TRAPPC2LQ9UL33 140 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 FLNAP21333 2647 aaKnown RBP12.74□□□□□ -0.37
DDB1-216ENST00000539739 CR1P17927 2039 aa12.74□□□□□ -0.37
DDB1-216ENST00000539739 IGHV2-70DA0A0C4DH43 119 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 MT-ND4P03905 459 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 CD99P14209 185 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 GATA3P23771 443 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 TAS2R20P59543 309 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 PITPNAQ00169 270 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 PNLIPRP3Q17RR3 467 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 HACD4Q5VWC8 232 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 PLET1Q6UQ28 207 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 DUSP18Q8NEJ0 188 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 OTOGQ6ZRI0 2925 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 KIR2DS1A0A191URI9 304 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 TMEM238LA0A1B0GVL6 79 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 TMEM235A6NFC5 223 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 GLP1RP43220 463 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 DVL1P1P54792 670 aaPredicted RBP12.73□□□□□ -0.37
DDB1-216ENST00000539739 TSPAN5P62079 268 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 DCAF12L2Q5VW00 463 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 OLFML2AQ68BL7 652 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 TMEM200BQ69YZ2 307 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 CNIH2Q6PI25 160 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 BAIAP2L2Q6UXY1 529 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
DDB1-216ENST00000539739 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 GAPTQ8N292 157 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 C15orf40Q8WUR7 153 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 AUNIPQ9H7T9 357 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 MMP26Q9NRE1 261 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 MLXQ9UH92 298 aa12.73□□□□□ -0.37
DDB1-216ENST00000539739 UBE2J1Q9Y385 318 aaPredicted RBP12.73□□□□□ -0.37
DDB1-216ENST00000539739 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
DDB1-216ENST00000539739 POM121CA8CG34 1229 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 ORC5O43913 435 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 MELTFP08582 738 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 GZMHP20718 246 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 PTBP1P26599 531 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDB1-216ENST00000539739 TNFSF8P32971 234 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 PAX2Q02962 417 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 LBHQ53QV2 105 aaPredicted RBP12.72□□□□□ -0.37
DDB1-216ENST00000539739 MRPL30Q8TCC3 161 aaKnown RBP12.72□□□□□ -0.37
DDB1-216ENST00000539739 ZNF431Q8TF32 576 aaPredicted RBP12.72□□□□□ -0.37
DDB1-216ENST00000539739 CORO2AQ92828 525 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 TMUB1Q9BVT8 246 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 ONECUT1Q9UBC0 465 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
DDB1-216ENST00000539739 YLPM1P49750 1951 aaKnown RBP12.71□□□□□ -0.37
DDB1-216ENST00000539739 hCG_1809904A0A1W2PP81 198 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 A0A1W2PPE2 198 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 A0A1W2PR64 198 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 A0A1W2PRV1 198 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 NAPSAO96009 420 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 FBP1P09467 338 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 ZNF16P17020 682 aaPredicted RBP12.71□□□□□ -0.37
DDB1-216ENST00000539739 RAB4AP20338 218 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 TRAT1Q6PIZ9 186 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 MOB1BQ7L9L4 216 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 MRGPRDQ8TDS7 321 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 HDHD3Q9BSH5 251 aaPredicted RBP12.71□□□□□ -0.37
DDB1-216ENST00000539739 TINAGL1Q9GZM7 467 aaPredicted RBP12.71□□□□□ -0.37
DDB1-216ENST00000539739 GAL3ST2Q9H3Q3 398 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 RAB9BQ9NP90 201 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 SDHAF2Q9NX18 166 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 TAS2R3Q9NYW6 316 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 KCNIP1Q9NZI2 227 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 MGAT4AQ9UM21 535 aa12.71□□□□□ -0.37
DDB1-216ENST00000539739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.71□□□□□ -0.376e-8■■■□□ 17.6
DDB1-216ENST00000539739 ARHGAP32A7KAX9 2087 aa12.71□□□□□ -0.38
DDB1-216ENST00000539739 ABCA1O95477 2261 aa12.71□□□□□ -0.38
DDB1-216ENST00000539739 ABCA2Q9BZC7 2435 aa12.71□□□□□ -0.38
DDB1-216ENST00000539739 WNK2Q9Y3S1 2297 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 MEX3AA1L020 520 aaKnown RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 RAB19A4D1S5 217 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 NUPL2O15504 423 aaKnown RBP12.7□□□□□ -0.38
DDB1-216ENST00000539739 HLA-DQB1P01920 261 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 ZNF728P0DKX0 622 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 PRSS3P35030 304 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 SPCS3P61009 180 aa12.7□□□□□ -0.38
DDB1-216ENST00000539739 ARF6P62330 175 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms