RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 TPBGQ13641 420 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 MED22Q15528 200 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 C6orf183Q5T699 404 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 LIPKQ5VXJ0 399 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 STEAP3Q658P3 488 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 OR10V1Q8NGI7 309 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 TMEM203Q969S6 136 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 SULT4A1Q9BR01 284 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 ANKRD60Q9BZ19 345 aa13.25□□□□□ -0.29
DDB1-215ENST00000539712 UBBP0CG47 229 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 CRHBPP24387 322 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 CD1BP29016 333 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 GNMTQ14749 295 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 TMEM30BQ3MIR4 351 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 MORN2Q502X0 79 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 PRR18Q8N4B5 295 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 Q8N9W7 124 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 OR4X2Q8NGF9 303 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 FAAP24Q9BTP7 215 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 TM2D1Q9BX74 207 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 CST11Q9H112 138 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 GNG12Q9UBI6 72 aa13.24□□□□□ -0.29
DDB1-215ENST00000539712 A0A0A6YYD4 124 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 PSMB11A5LHX3 300 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 TMEM14DPA8MWL7 114 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 RPS25P62851 125 aaKnown RBP13.23□□□□□ -0.29
DDB1-215ENST00000539712 RBM48Q5RL73 367 aaKnown RBP13.23□□□□□ -0.29
DDB1-215ENST00000539712 GLT8D1Q68CQ7 371 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 TRAT1Q6PIZ9 186 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 ZNF554Q86TJ5 538 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 TGIF2LXQ8IUE1 241 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 ODF3L1Q8IXM7 274 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 OR52L2PQ8NGH6 319 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 OR2T10Q8NGZ9 312 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 PHF21AQ96BD5 680 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 NICN1Q9BSH3 213 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 OR2S2Q9NQN1 319 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 LINC00527Q9UJ94 153 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
DDB1-215ENST00000539712 RGS10O43665 173 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 IGLL1P15814 213 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 F2RL1P55085 397 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 NKAPLQ5M9Q1 402 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 ETV3LQ6ZN32 361 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 C6orf201Q7Z4U5 140 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 UFD1Q92890 307 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 ABCG5Q9H222 651 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 RAB9BQ9NP90 201 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 ISYNA1Q9NPH2 558 aa13.22□□□□□ -0.29
DDB1-215ENST00000539712 COL7A1Q02388 2944 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 NCBP2LA6PVI3 153 aaKnown RBP13.21□□□□□ -0.29
DDB1-215ENST00000539712 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 LANCL1O43813 399 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 NAPSAO96009 420 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 MOSP00540 346 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 PF4V1P10720 104 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 CPEP16870 476 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 IL3RAP26951 378 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 PPP1CCP36873 323 aaKnown RBP13.21□□□□□ -0.29
DDB1-215ENST00000539712 MAP2K4P45985 399 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 GPR12P47775 334 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 HTD2P86397 168 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 HMGN3Q15651 99 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 ZNF880Q6PDB4 577 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 PRSS48Q7RTY5 328 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 SLC35E3Q7Z769 313 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 KCNG3Q8TAE7 436 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 S1PR3Q99500 378 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 TMEM59Q9BXS4 323 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 LPAR5Q9H1C0 372 aa13.21□□□□□ -0.29
DDB1-215ENST00000539712 LIN7CQ9NUP9 197 aaKnown RBP13.21□□□□□ -0.29
DDB1-215ENST00000539712 DNAH9Q9NYC9 4486 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
DDB1-215ENST00000539712 BPNT1O95861 308 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 HSMCR30P0CW71 290 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 RPL23AP62750 156 aaKnown RBP13.2□□□□□ -0.3
DDB1-215ENST00000539712 FABP5Q01469 135 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
DDB1-215ENST00000539712 LY6G6FQ5SQ64 297 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 FOXB2Q5VYV0 432 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 STPG2Q8N412 459 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 FAM89BQ8N5H3 189 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 FAM71E2Q8N5Q1 922 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 RITA1Q96K30 269 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 NEDD4LQ96PU5 975 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 KCNIP1Q9NZI2 227 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 JPT1Q9UK76 154 aa13.2□□□□□ -0.3
DDB1-215ENST00000539712 AK6Q9Y3D8 172 aaKnown RBP13.2□□□□□ -0.3
DDB1-215ENST00000539712 SLC17A2O00624 439 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 SOCS1O15524 211 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 TXNL1O43396 289 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 YPEL1O60688 119 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 CD33P20138 364 aa13.19□□□□□ -0.3
DDB1-215ENST00000539712 BLVRBP30043 206 aaPredicted RBP13.19□□□□□ -0.3
DDB1-215ENST00000539712 LSAMPQ13449 338 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms