RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 POLR3KQ9Y2Y1 108 aaPredicted RBP14.2□□□□□ -0.14
CLN6-202ENST00000538696 KIAA2026Q5HYC2 2103 aa14.2□□□□□ -0.14
CLN6-202ENST00000538696 MEIKINA0A087WXM9 373 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 B4DSR2 109 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 GPR37O15354 613 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 TRAPPC2P0DI81 140 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 TRAPPC2BP0DI82 140 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 PGAM2P15259 253 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 AADACP22760 399 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 NFYAP23511 347 aaPredicted RBP14.19□□□□□ -0.14
CLN6-202ENST00000538696 GZMKP49863 264 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 P2RX3P56373 397 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 EDDM3BP56851 147 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 PAX5Q02548 391 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 PAX2Q02962 417 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 BAMBIQ13145 260 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 METTL11BQ5VVY1 283 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 DHRS11Q6UWP2 260 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 TCF23Q7RTU1 214 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 ADAD2Q8NCV1 583 aaKnown RBP14.19□□□□□ -0.14
CLN6-202ENST00000538696 C8orf46Q8TAG6 207 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 MSI2Q96DH6 328 aaKnown RBP14.19□□□□□ -0.14
CLN6-202ENST00000538696 KIRREL1Q96J84 757 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 GPR132Q9UNW8 380 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 TEX15Q9BXT5 2789 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 ABCA1O95477 2261 aa14.19□□□□□ -0.14
CLN6-202ENST00000538696 MAP1AP78559 2803 aaPredicted RBP14.19□□□□□ -0.14
CLN6-202ENST00000538696 LOC105371242A0A075B767 164 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 A8MV72 311 aaPredicted RBP14.18□□□□□ -0.14
CLN6-202ENST00000538696 BET1O15155 118 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 MSMBP08118 114 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 ZNF16P17020 682 aaPredicted RBP14.18□□□□□ -0.14
CLN6-202ENST00000538696 ERP29P30040 261 aaKnown RBP14.18□□□□□ -0.14
CLN6-202ENST00000538696 RRAS2P62070 204 aaPredicted RBP14.18□□□□□ -0.14
CLN6-202ENST00000538696 AKAP14Q86UN6 197 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 SLC25A42Q86VD7 318 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 OR13A1Q8NGR1 328 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 MOB3AQ96BX8 217 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 C18orf12Q96KH6 178 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 C5orf66Q9H5L9 145 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 TAF9BQ9HBM6 251 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 RPUSD1Q9UJJ7 312 aaKnown RBP14.18□□□□□ -0.14
CLN6-202ENST00000538696 MGAT4AQ9UM21 535 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 WNK2Q9Y3S1 2297 aa14.18□□□□□ -0.14
CLN6-202ENST00000538696 TRBV23-1A0A0A0MS06 115 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 IGHV2-70DA0A0C4DH43 119 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 ODAMA1E959 279 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 C12orf77C9JDV5 145 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 CTXN2P0C2S0 81 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 PI3P19957 117 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 FXYD4P59646 89 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 KRTAP1-1Q07627 177 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 FCN2Q15485 313 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 C11orf91Q3C1V1 193 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 CD276Q5ZPR3 534 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 ZNF626Q68DY1 528 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 FAM185AQ8N0U4 392 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 LY6G5BQ8NDX9 201 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 OR1L1Q8NH94 360 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 MRGPRDQ8TDS7 321 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 TOMM40LQ969M1 308 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 TMEM230Q96A57 120 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 RTBDNQ9BSG5 229 aaPredicted RBP14.17□□□□□ -0.14
CLN6-202ENST00000538696 TMUB1Q9BVT8 246 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 ALX4Q9H161 411 aaPredicted RBP14.17□□□□□ -0.14
CLN6-202ENST00000538696 MED28Q9H204 178 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 GPN1Q9HCN4 374 aaPredicted RBP14.17□□□□□ -0.14
CLN6-202ENST00000538696 MMP26Q9NRE1 261 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 OR1A1Q9P1Q5 309 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 ZNF69Q9UC07 566 aa14.17□□□□□ -0.14
CLN6-202ENST00000538696 TRBV6-7A0A0A0MS04 114 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 MEX3AA1L020 520 aaKnown RBP14.16□□□□□ -0.14
CLN6-202ENST00000538696 SNRPGP15A8MWD9 76 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 TUSC2O75896 110 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 OR4E1P0C645 316 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 HERV-K104P61576 105 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 RPL31P62899 125 aaKnown RBP14.16□□□□□ -0.14
CLN6-202ENST00000538696 ZNF273Q14593 569 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 SURF2Q15527 256 aaPredicted RBP14.16□□□□□ -0.14
CLN6-202ENST00000538696 C4orf46Q504U0 113 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 C6orf183Q5T699 404 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 ZNF554Q86TJ5 538 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 SCGB3A2Q96PL1 93 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 KCNIP1Q9NZI2 227 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 SLC23A1Q9UHI7 598 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 ACANP16112 2415 aa14.16□□□□□ -0.14
CLN6-202ENST00000538696 NPIPB11E5RHQ5 1161 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 BOLA2-SMG1P6H3BVE0 249 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 ENSAO43768 121 aaKnown RBP14.15□□□□□ -0.14
CLN6-202ENST00000538696 SSNA1O43805 119 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 PPYP01298 95 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 CTSDP07339 412 aaPredicted RBP14.15□□□□□ -0.14
CLN6-202ENST00000538696 ZNF728P0DKX0 622 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 ECI1P42126 302 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 TAS2R31P59538 309 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 MEF2CQ06413 473 aaPredicted RBP14.15□□□□□ -0.14
CLN6-202ENST00000538696 PPP1R1AQ13522 171 aa14.15□□□□□ -0.14
CLN6-202ENST00000538696 TMEM200BQ69YZ2 307 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms